Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC31.37■■■□□ 2.61
SHANK2Q9UPX8 AC060766.5-201ENST00000590539 871 ntBASIC31.37■■■□□ 2.61
SHANK2Q9UPX8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SHANK2Q9UPX8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SHANK2Q9UPX8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SHANK2Q9UPX8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC31.36■■■□□ 2.61
SHANK2Q9UPX8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SHANK2Q9UPX8 MCRIP2P1-201ENST00000394346 511 ntBASIC31.36■■■□□ 2.61
SHANK2Q9UPX8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SHANK2Q9UPX8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC31.36■■■□□ 2.61
SHANK2Q9UPX8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC31.36■■■□□ 2.61
SHANK2Q9UPX8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SHANK2Q9UPX8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SHANK2Q9UPX8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SHANK2Q9UPX8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SHANK2Q9UPX8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
SHANK2Q9UPX8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC31.35■■■□□ 2.61
SHANK2Q9UPX8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SHANK2Q9UPX8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC31.34■■■□□ 2.61
SHANK2Q9UPX8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
SHANK2Q9UPX8 LSM12P1-201ENST00000411836 588 ntBASIC31.34■■■□□ 2.61
SHANK2Q9UPX8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC31.34■■■□□ 2.61
SHANK2Q9UPX8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC31.34■■■□□ 2.61
SHANK2Q9UPX8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC31.34■■■□□ 2.61
SHANK2Q9UPX8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
SHANK2Q9UPX8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SHANK2Q9UPX8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SHANK2Q9UPX8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SHANK2Q9UPX8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
SHANK2Q9UPX8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC31.33■■■□□ 2.61
SHANK2Q9UPX8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC31.33■■■□□ 2.61
SHANK2Q9UPX8 AC026366.1-201ENST00000488803 879 ntBASIC31.33■■■□□ 2.61
SHANK2Q9UPX8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SHANK2Q9UPX8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SHANK2Q9UPX8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
SHANK2Q9UPX8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SHANK2Q9UPX8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC31.33■■■□□ 2.61
SHANK2Q9UPX8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SHANK2Q9UPX8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SHANK2Q9UPX8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC31.33■■■□□ 2.61
SHANK2Q9UPX8 NME6-213ENST00000451657 871 ntTSL 2 BASIC31.33■■■□□ 2.61
SHANK2Q9UPX8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC31.33■■■□□ 2.61
SHANK2Q9UPX8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
SHANK2Q9UPX8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC31.32■■■□□ 2.6
SHANK2Q9UPX8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SHANK2Q9UPX8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC31.32■■■□□ 2.6
SHANK2Q9UPX8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC31.32■■■□□ 2.6
SHANK2Q9UPX8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SHANK2Q9UPX8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC31.32■■■□□ 2.6
SHANK2Q9UPX8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC31.32■■■□□ 2.6
SHANK2Q9UPX8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SHANK2Q9UPX8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SHANK2Q9UPX8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC31.32■■■□□ 2.6
SHANK2Q9UPX8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SHANK2Q9UPX8 CYP21A1P-202ENST00000354927 1481 ntBASIC31.32■■■□□ 2.6
SHANK2Q9UPX8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SHANK2Q9UPX8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SHANK2Q9UPX8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SHANK2Q9UPX8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC31.31■■■□□ 2.6
SHANK2Q9UPX8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SHANK2Q9UPX8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC31.31■■■□□ 2.6
SHANK2Q9UPX8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
SHANK2Q9UPX8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC31.31■■■□□ 2.6
SHANK2Q9UPX8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SHANK2Q9UPX8 AL589743.5-201ENST00000616611 1050 ntBASIC31.31■■■□□ 2.6
SHANK2Q9UPX8 AC105020.6-201ENST00000621523 1217 ntBASIC31.31■■■□□ 2.6
SHANK2Q9UPX8 HLA-B-256ENST00000639848 1089 ntBASIC31.31■■■□□ 2.6
SHANK2Q9UPX8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SHANK2Q9UPX8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SHANK2Q9UPX8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC31.3■■■□□ 2.6
SHANK2Q9UPX8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC31.3■■■□□ 2.6
SHANK2Q9UPX8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SHANK2Q9UPX8 AC008403.3-201ENST00000598924 454 ntBASIC31.3■■■□□ 2.6
SHANK2Q9UPX8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SHANK2Q9UPX8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC31.3■■■□□ 2.6
SHANK2Q9UPX8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SHANK2Q9UPX8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SHANK2Q9UPX8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SHANK2Q9UPX8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SHANK2Q9UPX8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SHANK2Q9UPX8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SHANK2Q9UPX8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SHANK2Q9UPX8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SHANK2Q9UPX8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SHANK2Q9UPX8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SHANK2Q9UPX8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC31.29■■■□□ 2.6
SHANK2Q9UPX8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC31.29■■■□□ 2.6
SHANK2Q9UPX8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC31.29■■■□□ 2.6
SHANK2Q9UPX8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
SHANK2Q9UPX8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
SHANK2Q9UPX8 AC006058.3-201ENST00000606217 1069 ntBASIC31.29■■■□□ 2.6
SHANK2Q9UPX8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SHANK2Q9UPX8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SHANK2Q9UPX8 C9orf163-202ENST00000624034 2573 ntBASIC31.28■■■□□ 2.6
SHANK2Q9UPX8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC31.28■■■□□ 2.6
SHANK2Q9UPX8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC31.28■■■□□ 2.6
SHANK2Q9UPX8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SHANK2Q9UPX8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SHANK2Q9UPX8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
SHANK2Q9UPX8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms