Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SLC52A1Q9NWF4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SLC52A1Q9NWF4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SLC52A1Q9NWF4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
SLC52A1Q9NWF4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC30.23■■■□□ 2.43
SLC52A1Q9NWF4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC30.23■■■□□ 2.43
SLC52A1Q9NWF4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC30.23■■■□□ 2.43
SLC52A1Q9NWF4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
SLC52A1Q9NWF4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SLC52A1Q9NWF4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
SLC52A1Q9NWF4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
SLC52A1Q9NWF4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SLC52A1Q9NWF4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC30.22■■■□□ 2.43
SLC52A1Q9NWF4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SLC52A1Q9NWF4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC30.22■■■□□ 2.43
SLC52A1Q9NWF4 Z99916.2-201ENST00000604037 246 ntBASIC30.22■■■□□ 2.43
SLC52A1Q9NWF4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SLC52A1Q9NWF4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC30.22■■■□□ 2.43
SLC52A1Q9NWF4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SLC52A1Q9NWF4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SLC52A1Q9NWF4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC30.21■■■□□ 2.43
SLC52A1Q9NWF4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC30.21■■■□□ 2.43
SLC52A1Q9NWF4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC30.21■■■□□ 2.43
SLC52A1Q9NWF4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SLC52A1Q9NWF4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SLC52A1Q9NWF4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC30.21■■■□□ 2.43
SLC52A1Q9NWF4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC30.21■■■□□ 2.43
SLC52A1Q9NWF4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC30.21■■■□□ 2.43
SLC52A1Q9NWF4 AC233263.1-201ENST00000578059 224 ntBASIC30.21■■■□□ 2.43
SLC52A1Q9NWF4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC30.21■■■□□ 2.43
SLC52A1Q9NWF4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC30.21■■■□□ 2.43
SLC52A1Q9NWF4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
SLC52A1Q9NWF4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC30.2■■■□□ 2.43
SLC52A1Q9NWF4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
SLC52A1Q9NWF4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
SLC52A1Q9NWF4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
SLC52A1Q9NWF4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
SLC52A1Q9NWF4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC30.2■■■□□ 2.43
SLC52A1Q9NWF4 OR2A1-AS1-207ENST00000486094 819 ntBASIC30.2■■■□□ 2.43
SLC52A1Q9NWF4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
SLC52A1Q9NWF4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC30.2■■■□□ 2.43
SLC52A1Q9NWF4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC30.2■■■□□ 2.43
SLC52A1Q9NWF4 AC069544.1-201ENST00000609399 999 ntBASIC30.2■■■□□ 2.43
SLC52A1Q9NWF4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC30.2■■■□□ 2.43
SLC52A1Q9NWF4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
SLC52A1Q9NWF4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC30.2■■■□□ 2.43
SLC52A1Q9NWF4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC30.2■■■□□ 2.42
SLC52A1Q9NWF4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.42
SLC52A1Q9NWF4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
SLC52A1Q9NWF4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
SLC52A1Q9NWF4 C11orf96-202ENST00000528572 1834 ntBASIC30.19■■■□□ 2.42
SLC52A1Q9NWF4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC30.19■■■□□ 2.42
SLC52A1Q9NWF4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SLC52A1Q9NWF4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SLC52A1Q9NWF4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC30.19■■■□□ 2.42
SLC52A1Q9NWF4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC30.19■■■□□ 2.42
SLC52A1Q9NWF4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC30.19■■■□□ 2.42
SLC52A1Q9NWF4 AC007322.3-201ENST00000426526 701 ntBASIC30.19■■■□□ 2.42
SLC52A1Q9NWF4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC30.19■■■□□ 2.42
SLC52A1Q9NWF4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SLC52A1Q9NWF4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC30.19■■■□□ 2.42
SLC52A1Q9NWF4 AC073912.3-201ENST00000624414 853 ntBASIC30.19■■■□□ 2.42
SLC52A1Q9NWF4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC30.19■■■□□ 2.42
SLC52A1Q9NWF4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SLC52A1Q9NWF4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC30.19■■■□□ 2.42
SLC52A1Q9NWF4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SLC52A1Q9NWF4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC30.18■■■□□ 2.42
SLC52A1Q9NWF4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SLC52A1Q9NWF4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC30.18■■■□□ 2.42
SLC52A1Q9NWF4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SLC52A1Q9NWF4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC30.18■■■□□ 2.42
SLC52A1Q9NWF4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC30.18■■■□□ 2.42
SLC52A1Q9NWF4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC30.18■■■□□ 2.42
SLC52A1Q9NWF4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC30.18■■■□□ 2.42
SLC52A1Q9NWF4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SLC52A1Q9NWF4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC30.18■■■□□ 2.42
SLC52A1Q9NWF4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC30.18■■■□□ 2.42
SLC52A1Q9NWF4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SLC52A1Q9NWF4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SLC52A1Q9NWF4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SLC52A1Q9NWF4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC30.17■■■□□ 2.42
SLC52A1Q9NWF4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SLC52A1Q9NWF4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SLC52A1Q9NWF4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC30.17■■■□□ 2.42
SLC52A1Q9NWF4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SLC52A1Q9NWF4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC30.17■■■□□ 2.42
SLC52A1Q9NWF4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC30.17■■■□□ 2.42
SLC52A1Q9NWF4 SOX15-203ENST00000570788 1093 ntBASIC30.17■■■□□ 2.42
SLC52A1Q9NWF4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC30.17■■■□□ 2.42
SLC52A1Q9NWF4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC30.17■■■□□ 2.42
SLC52A1Q9NWF4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SLC52A1Q9NWF4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC30.16■■■□□ 2.42
SLC52A1Q9NWF4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC30.16■■■□□ 2.42
SLC52A1Q9NWF4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SLC52A1Q9NWF4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SLC52A1Q9NWF4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SLC52A1Q9NWF4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SLC52A1Q9NWF4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SLC52A1Q9NWF4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC30.16■■■□□ 2.42
SLC52A1Q9NWF4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms