Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab28Q99KL7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab28Q99KL7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rab28Q99KL7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rab28Q99KL7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab28Q99KL7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab28Q99KL7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rab28Q99KL7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.72■□□□□ 0.43
Rab28Q99KL7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab28Q99KL7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rab28Q99KL7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rab28Q99KL7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab28Q99KL7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rab28Q99KL7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab28Q99KL7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rab28Q99KL7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab28Q99KL7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab28Q99KL7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab28Q99KL7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab28Q99KL7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab28Q99KL7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab28Q99KL7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab28Q99KL7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.71■□□□□ 0.43
Rab28Q99KL7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab28Q99KL7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Rab28Q99KL7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.71■□□□□ 0.43
Rab28Q99KL7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rab28Q99KL7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rab28Q99KL7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab28Q99KL7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rab28Q99KL7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab28Q99KL7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rab28Q99KL7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.7■□□□□ 0.42
Rab28Q99KL7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab28Q99KL7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab28Q99KL7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.7■□□□□ 0.42
Rab28Q99KL7 Gm2399-201ENSMUST00000104944 225 ntBASIC17.7■□□□□ 0.42
Rab28Q99KL7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rab28Q99KL7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.7■□□□□ 0.42
Rab28Q99KL7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab28Q99KL7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.7■□□□□ 0.42
Rab28Q99KL7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab28Q99KL7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.7■□□□□ 0.42
Rab28Q99KL7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab28Q99KL7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab28Q99KL7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab28Q99KL7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.69■□□□□ 0.42
Rab28Q99KL7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab28Q99KL7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rab28Q99KL7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.69■□□□□ 0.42
Rab28Q99KL7 Gm2559-201ENSMUST00000201323 363 ntBASIC17.69■□□□□ 0.42
Rab28Q99KL7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.69■□□□□ 0.42
Rab28Q99KL7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.69■□□□□ 0.42
Rab28Q99KL7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab28Q99KL7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rab28Q99KL7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab28Q99KL7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab28Q99KL7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rab28Q99KL7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Rab28Q99KL7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.69■□□□□ 0.42
Rab28Q99KL7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.68■□□□□ 0.42
Rab28Q99KL7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rab28Q99KL7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rab28Q99KL7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rab28Q99KL7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab28Q99KL7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rab28Q99KL7 Gm20049-201ENSMUST00000219950 730 ntBASIC17.68■□□□□ 0.42
Rab28Q99KL7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab28Q99KL7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rab28Q99KL7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.68■□□□□ 0.42
Rab28Q99KL7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab28Q99KL7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab28Q99KL7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab28Q99KL7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab28Q99KL7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab28Q99KL7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab28Q99KL7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab28Q99KL7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.67■□□□□ 0.42
Rab28Q99KL7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab28Q99KL7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.67■□□□□ 0.42
Rab28Q99KL7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab28Q99KL7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab28Q99KL7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.67■□□□□ 0.42
Rab28Q99KL7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab28Q99KL7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab28Q99KL7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab28Q99KL7 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.67■□□□□ 0.42
Rab28Q99KL7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.66■□□□□ 0.42
Rab28Q99KL7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab28Q99KL7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab28Q99KL7 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.66■□□□□ 0.42
Rab28Q99KL7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.66■□□□□ 0.42
Rab28Q99KL7 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.66■□□□□ 0.42
Rab28Q99KL7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rab28Q99KL7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rab28Q99KL7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rab28Q99KL7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.66■□□□□ 0.42
Rab28Q99KL7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.65■□□□□ 0.42
Rab28Q99KL7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab28Q99KL7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms