Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Col20a1Q923P0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col20a1Q923P0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Col20a1Q923P0 Gm10138-203ENSMUST00000206952 366 ntBASIC21.67■■□□□ 1.06
Col20a1Q923P0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col20a1Q923P0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Col20a1Q923P0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col20a1Q923P0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col20a1Q923P0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Col20a1Q923P0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Col20a1Q923P0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Col20a1Q923P0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col20a1Q923P0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.65■■□□□ 1.06
Col20a1Q923P0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col20a1Q923P0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col20a1Q923P0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col20a1Q923P0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.65■■□□□ 1.06
Col20a1Q923P0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Col20a1Q923P0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.65■■□□□ 1.06
Col20a1Q923P0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col20a1Q923P0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Col20a1Q923P0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col20a1Q923P0 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.64■■□□□ 1.06
Col20a1Q923P0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col20a1Q923P0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col20a1Q923P0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.64■■□□□ 1.05
Col20a1Q923P0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col20a1Q923P0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Col20a1Q923P0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col20a1Q923P0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col20a1Q923P0 BC021767-201ENSMUST00000126387 1716 ntBASIC21.64■■□□□ 1.05
Col20a1Q923P0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col20a1Q923P0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Col20a1Q923P0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col20a1Q923P0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col20a1Q923P0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.63■■□□□ 1.05
Col20a1Q923P0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Col20a1Q923P0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col20a1Q923P0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col20a1Q923P0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Col20a1Q923P0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col20a1Q923P0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col20a1Q923P0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col20a1Q923P0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Col20a1Q923P0 Mir1199-201ENSMUST00000117015 119 ntBASIC21.62■■□□□ 1.05
Col20a1Q923P0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col20a1Q923P0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.62■■□□□ 1.05
Col20a1Q923P0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.62■■□□□ 1.05
Col20a1Q923P0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col20a1Q923P0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.62■■□□□ 1.05
Col20a1Q923P0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Col20a1Q923P0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col20a1Q923P0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col20a1Q923P0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col20a1Q923P0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col20a1Q923P0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col20a1Q923P0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col20a1Q923P0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col20a1Q923P0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col20a1Q923P0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.61■■□□□ 1.05
Col20a1Q923P0 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.61■■□□□ 1.05
Col20a1Q923P0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Col20a1Q923P0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col20a1Q923P0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.61■■□□□ 1.05
Col20a1Q923P0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.61■■□□□ 1.05
Col20a1Q923P0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.61■■□□□ 1.05
Col20a1Q923P0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.61■■□□□ 1.05
Col20a1Q923P0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
Col20a1Q923P0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col20a1Q923P0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col20a1Q923P0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Col20a1Q923P0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.6■■□□□ 1.05
Col20a1Q923P0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col20a1Q923P0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col20a1Q923P0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col20a1Q923P0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col20a1Q923P0 Gm15375-201ENSMUST00000119510 849 ntBASIC21.6■■□□□ 1.05
Col20a1Q923P0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.6■■□□□ 1.05
Col20a1Q923P0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col20a1Q923P0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Col20a1Q923P0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Col20a1Q923P0 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.6■■□□□ 1.05
Col20a1Q923P0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms