Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF44Q7L0R7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RNF44Q7L0R7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF44Q7L0R7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF44Q7L0R7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RNF44Q7L0R7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF44Q7L0R7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF44Q7L0R7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF44Q7L0R7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF44Q7L0R7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.06■□□□□ 0.8
RNF44Q7L0R7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF44Q7L0R7 AC244015.2-201ENST00000616358 1861 ntBASIC20.06■□□□□ 0.8
RNF44Q7L0R7 RARRES2P11-201ENST00000635158 484 ntBASIC20.06■□□□□ 0.8
RNF44Q7L0R7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF44Q7L0R7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF44Q7L0R7 AC079834.2-201ENST00000609776 1949 ntBASIC20.06■□□□□ 0.8
RNF44Q7L0R7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RNF44Q7L0R7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF44Q7L0R7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 AC010536.3-201ENST00000620306 533 ntBASIC20.05■□□□□ 0.8
RNF44Q7L0R7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF44Q7L0R7 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 CDCA4P2-201ENST00000441182 718 ntBASIC20.04■□□□□ 0.8
RNF44Q7L0R7 DUX4L16-201ENST00000555130 1264 ntBASIC20.04■□□□□ 0.8
RNF44Q7L0R7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 RAP2CP1-201ENST00000605103 478 ntBASIC20.04■□□□□ 0.8
RNF44Q7L0R7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 FBXW4P1-201ENST00000426721 2239 ntBASIC20.04■□□□□ 0.8
RNF44Q7L0R7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF44Q7L0R7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RNF44Q7L0R7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RNF44Q7L0R7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF44Q7L0R7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF44Q7L0R7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF44Q7L0R7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF44Q7L0R7 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.03■□□□□ 0.8
RNF44Q7L0R7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF44Q7L0R7 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF44Q7L0R7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RNF44Q7L0R7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF44Q7L0R7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF44Q7L0R7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF44Q7L0R7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF44Q7L0R7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF44Q7L0R7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF44Q7L0R7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF44Q7L0R7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF44Q7L0R7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF44Q7L0R7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF44Q7L0R7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF44Q7L0R7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF44Q7L0R7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF44Q7L0R7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF44Q7L0R7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF44Q7L0R7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF44Q7L0R7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF44Q7L0R7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF44Q7L0R7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF44Q7L0R7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF44Q7L0R7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF44Q7L0R7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF44Q7L0R7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RNF44Q7L0R7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms