Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.68■■□□□ 1.22
CNKSR3Q6P9H4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.68■■□□□ 1.22
CNKSR3Q6P9H4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CNKSR3Q6P9H4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CNKSR3Q6P9H4 AC092053.2-201ENST00000640557 1818 ntBASIC22.68■■□□□ 1.22
CNKSR3Q6P9H4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNKSR3Q6P9H4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.68■■□□□ 1.22
CNKSR3Q6P9H4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.68■■□□□ 1.22
CNKSR3Q6P9H4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNKSR3Q6P9H4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR3Q6P9H4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR3Q6P9H4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.67■■□□□ 1.22
CNKSR3Q6P9H4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR3Q6P9H4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR3Q6P9H4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CNKSR3Q6P9H4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR3Q6P9H4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.67■■□□□ 1.22
CNKSR3Q6P9H4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.67■■□□□ 1.22
CNKSR3Q6P9H4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.67■■□□□ 1.22
CNKSR3Q6P9H4 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.67■■□□□ 1.22
CNKSR3Q6P9H4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.67■■□□□ 1.22
CNKSR3Q6P9H4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR3Q6P9H4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.67■■□□□ 1.22
CNKSR3Q6P9H4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR3Q6P9H4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR3Q6P9H4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNKSR3Q6P9H4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.66■■□□□ 1.22
CNKSR3Q6P9H4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
CNKSR3Q6P9H4 AC093323.1-202ENST00000635031 2045 ntBASIC22.66■■□□□ 1.22
CNKSR3Q6P9H4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CNKSR3Q6P9H4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CNKSR3Q6P9H4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNKSR3Q6P9H4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNKSR3Q6P9H4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.66■■□□□ 1.22
CNKSR3Q6P9H4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.66■■□□□ 1.22
CNKSR3Q6P9H4 SOX15-203ENST00000570788 1093 ntBASIC22.66■■□□□ 1.22
CNKSR3Q6P9H4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.66■■□□□ 1.22
CNKSR3Q6P9H4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.66■■□□□ 1.22
CNKSR3Q6P9H4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CNKSR3Q6P9H4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.66■■□□□ 1.22
CNKSR3Q6P9H4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNKSR3Q6P9H4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNKSR3Q6P9H4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CNKSR3Q6P9H4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CNKSR3Q6P9H4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CNKSR3Q6P9H4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNKSR3Q6P9H4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNKSR3Q6P9H4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNKSR3Q6P9H4 AC007322.3-201ENST00000426526 701 ntBASIC22.65■■□□□ 1.22
CNKSR3Q6P9H4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CNKSR3Q6P9H4 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.65■■□□□ 1.22
CNKSR3Q6P9H4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.65■■□□□ 1.22
CNKSR3Q6P9H4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.65■■□□□ 1.22
CNKSR3Q6P9H4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.65■■□□□ 1.22
CNKSR3Q6P9H4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.65■■□□□ 1.22
CNKSR3Q6P9H4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.65■■□□□ 1.22
CNKSR3Q6P9H4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNKSR3Q6P9H4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNKSR3Q6P9H4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CNKSR3Q6P9H4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CNKSR3Q6P9H4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.64■■□□□ 1.22
CNKSR3Q6P9H4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
CNKSR3Q6P9H4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.64■■□□□ 1.22
CNKSR3Q6P9H4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CNKSR3Q6P9H4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CNKSR3Q6P9H4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.64■■□□□ 1.21
CNKSR3Q6P9H4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CNKSR3Q6P9H4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CNKSR3Q6P9H4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CNKSR3Q6P9H4 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.64■■□□□ 1.21
CNKSR3Q6P9H4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.64■■□□□ 1.21
CNKSR3Q6P9H4 AC233263.1-201ENST00000578059 224 ntBASIC22.64■■□□□ 1.21
CNKSR3Q6P9H4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.64■■□□□ 1.21
CNKSR3Q6P9H4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.64■■□□□ 1.21
CNKSR3Q6P9H4 Z99916.2-201ENST00000604037 246 ntBASIC22.64■■□□□ 1.21
CNKSR3Q6P9H4 AC069544.1-201ENST00000609399 999 ntBASIC22.64■■□□□ 1.21
CNKSR3Q6P9H4 AC073912.3-201ENST00000624414 853 ntBASIC22.64■■□□□ 1.21
CNKSR3Q6P9H4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
CNKSR3Q6P9H4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CNKSR3Q6P9H4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.63■■□□□ 1.21
CNKSR3Q6P9H4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CNKSR3Q6P9H4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
CNKSR3Q6P9H4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.63■■□□□ 1.21
CNKSR3Q6P9H4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.63■■□□□ 1.21
CNKSR3Q6P9H4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.63■■□□□ 1.21
CNKSR3Q6P9H4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
CNKSR3Q6P9H4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CNKSR3Q6P9H4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
CNKSR3Q6P9H4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.63■■□□□ 1.21
CNKSR3Q6P9H4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.63■■□□□ 1.21
CNKSR3Q6P9H4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CNKSR3Q6P9H4 C11orf96-202ENST00000528572 1834 ntBASIC22.63■■□□□ 1.21
CNKSR3Q6P9H4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CNKSR3Q6P9H4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.63■■□□□ 1.21
CNKSR3Q6P9H4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.62■■□□□ 1.21
CNKSR3Q6P9H4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CNKSR3Q6P9H4 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.62■■□□□ 1.21
CNKSR3Q6P9H4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CNKSR3Q6P9H4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CNKSR3Q6P9H4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms