Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav3-1Q5R1I8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav3-1Q5R1I8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3-1Q5R1I8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Trav3-1Q5R1I8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav3-1Q5R1I8 Gm16148-201ENSMUST00000119653 893 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms