Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.46■□□□□ 0.55
SRP9P49458 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SRP9P49458 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.46■□□□□ 0.55
SRP9P49458 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP9P49458 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SRP9P49458 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SRP9P49458 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
SRP9P49458 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SRP9P49458 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SRP9P49458 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SRP9P49458 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SRP9P49458 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SRP9P49458 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SRP9P49458 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SRP9P49458 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.45■□□□□ 0.54
SRP9P49458 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.45■□□□□ 0.54
SRP9P49458 AC079089.2-201ENST00000531211 1277 ntBASIC18.45■□□□□ 0.54
SRP9P49458 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.45■□□□□ 0.54
SRP9P49458 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.45■□□□□ 0.54
SRP9P49458 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SRP9P49458 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SRP9P49458 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SRP9P49458 AC019069.1-201ENST00000610008 1333 ntBASIC18.45■□□□□ 0.54
SRP9P49458 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SRP9P49458 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SRP9P49458 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
SRP9P49458 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SRP9P49458 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SRP9P49458 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SRP9P49458 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SRP9P49458 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SRP9P49458 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SRP9P49458 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.44■□□□□ 0.54
SRP9P49458 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SRP9P49458 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.44■□□□□ 0.54
SRP9P49458 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SRP9P49458 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.44■□□□□ 0.54
SRP9P49458 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.44■□□□□ 0.54
SRP9P49458 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SRP9P49458 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SRP9P49458 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SRP9P49458 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
SRP9P49458 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.44■□□□□ 0.54
SRP9P49458 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SRP9P49458 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SRP9P49458 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SRP9P49458 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SRP9P49458 PCDHAC2-203ENST00000615316 3011 ntBASIC18.43■□□□□ 0.54
SRP9P49458 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SRP9P49458 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SRP9P49458 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SRP9P49458 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SRP9P49458 IRS3P-201ENST00000223076 1006 ntBASIC18.43■□□□□ 0.54
SRP9P49458 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.43■□□□□ 0.54
SRP9P49458 MIR572-201ENST00000384983 95 ntBASIC18.43■□□□□ 0.54
SRP9P49458 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.43■□□□□ 0.54
SRP9P49458 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SRP9P49458 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.43■□□□□ 0.54
SRP9P49458 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.43■□□□□ 0.54
SRP9P49458 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.43■□□□□ 0.54
SRP9P49458 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.43■□□□□ 0.54
SRP9P49458 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SRP9P49458 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SRP9P49458 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SRP9P49458 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.43■□□□□ 0.54
SRP9P49458 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.43■□□□□ 0.54
SRP9P49458 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRP9P49458 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.42■□□□□ 0.54
SRP9P49458 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.42■□□□□ 0.54
SRP9P49458 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
SRP9P49458 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRP9P49458 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRP9P49458 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRP9P49458 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.42■□□□□ 0.54
SRP9P49458 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.42■□□□□ 0.54
SRP9P49458 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.42■□□□□ 0.54
SRP9P49458 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRP9P49458 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SRP9P49458 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRP9P49458 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
SRP9P49458 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SRP9P49458 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRP9P49458 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.42■□□□□ 0.54
SRP9P49458 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.42■□□□□ 0.54
SRP9P49458 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SRP9P49458 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.41■□□□□ 0.54
SRP9P49458 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRP9P49458 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRP9P49458 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.41■□□□□ 0.54
SRP9P49458 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRP9P49458 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRP9P49458 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.41■□□□□ 0.54
SRP9P49458 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SRP9P49458 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.41■□□□□ 0.54
SRP9P49458 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SRP9P49458 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRP9P49458 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRP9P49458 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SRP9P49458 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SRP9P49458 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms