Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.9■□□□□ 0.62
LmnaP48678 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LmnaP48678 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.9■□□□□ 0.62
LmnaP48678 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LmnaP48678 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LmnaP48678 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LmnaP48678 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LmnaP48678 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LmnaP48678 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LmnaP48678 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
LmnaP48678 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LmnaP48678 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LmnaP48678 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LmnaP48678 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LmnaP48678 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LmnaP48678 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LmnaP48678 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LmnaP48678 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LmnaP48678 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LmnaP48678 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LmnaP48678 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.88■□□□□ 0.61
LmnaP48678 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LmnaP48678 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LmnaP48678 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LmnaP48678 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LmnaP48678 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LmnaP48678 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LmnaP48678 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LmnaP48678 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LmnaP48678 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LmnaP48678 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LmnaP48678 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
LmnaP48678 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LmnaP48678 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LmnaP48678 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LmnaP48678 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LmnaP48678 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LmnaP48678 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LmnaP48678 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LmnaP48678 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LmnaP48678 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LmnaP48678 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LmnaP48678 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.86■□□□□ 0.61
LmnaP48678 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LmnaP48678 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LmnaP48678 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LmnaP48678 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LmnaP48678 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.86■□□□□ 0.61
LmnaP48678 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.86■□□□□ 0.61
LmnaP48678 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LmnaP48678 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LmnaP48678 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LmnaP48678 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LmnaP48678 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LmnaP48678 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LmnaP48678 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LmnaP48678 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LmnaP48678 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LmnaP48678 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LmnaP48678 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LmnaP48678 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LmnaP48678 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LmnaP48678 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LmnaP48678 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LmnaP48678 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LmnaP48678 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LmnaP48678 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LmnaP48678 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LmnaP48678 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LmnaP48678 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LmnaP48678 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.85■□□□□ 0.61
LmnaP48678 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
LmnaP48678 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LmnaP48678 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LmnaP48678 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LmnaP48678 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LmnaP48678 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LmnaP48678 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LmnaP48678 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LmnaP48678 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LmnaP48678 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LmnaP48678 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.84■□□□□ 0.61
LmnaP48678 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LmnaP48678 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LmnaP48678 Gm9987-201ENSMUST00000069768 567 ntBASIC18.84■□□□□ 0.61
LmnaP48678 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LmnaP48678 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LmnaP48678 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LmnaP48678 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LmnaP48678 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LmnaP48678 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LmnaP48678 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LmnaP48678 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
LmnaP48678 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LmnaP48678 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LmnaP48678 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LmnaP48678 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LmnaP48678 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
LmnaP48678 Gm37055-201ENSMUST00000191866 133 ntBASIC18.83■□□□□ 0.6
LmnaP48678 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms