Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.35■□□□□ 0.69
Ifnb1P01575 Gm5874-201ENSMUST00000096101 508 ntBASIC19.35■□□□□ 0.69
Ifnb1P01575 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ifnb1P01575 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.35■□□□□ 0.69
Ifnb1P01575 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ifnb1P01575 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Ifnb1P01575 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Ifnb1P01575 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ifnb1P01575 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.35■□□□□ 0.69
Ifnb1P01575 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ifnb1P01575 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ifnb1P01575 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Ifnb1P01575 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ifnb1P01575 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ifnb1P01575 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ifnb1P01575 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.34■□□□□ 0.69
Ifnb1P01575 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ifnb1P01575 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.34■□□□□ 0.69
Ifnb1P01575 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ifnb1P01575 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ifnb1P01575 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.34■□□□□ 0.69
Ifnb1P01575 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ifnb1P01575 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ifnb1P01575 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Ifnb1P01575 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ifnb1P01575 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ifnb1P01575 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ifnb1P01575 Gm42642-201ENSMUST00000200683 355 ntBASIC19.33■□□□□ 0.68
Ifnb1P01575 Gm7514-201ENSMUST00000209475 934 ntBASIC19.33■□□□□ 0.68
Ifnb1P01575 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ifnb1P01575 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ifnb1P01575 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.33■□□□□ 0.68
Ifnb1P01575 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ifnb1P01575 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ifnb1P01575 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ifnb1P01575 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ifnb1P01575 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ifnb1P01575 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ifnb1P01575 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ifnb1P01575 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.33■□□□□ 0.68
Ifnb1P01575 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ifnb1P01575 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ifnb1P01575 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.32■□□□□ 0.68
Ifnb1P01575 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ifnb1P01575 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ifnb1P01575 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ifnb1P01575 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ifnb1P01575 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ifnb1P01575 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ifnb1P01575 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ifnb1P01575 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ifnb1P01575 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ifnb1P01575 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ifnb1P01575 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ifnb1P01575 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ifnb1P01575 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Ifnb1P01575 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.31■□□□□ 0.68
Ifnb1P01575 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ifnb1P01575 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ifnb1P01575 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ifnb1P01575 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.31■□□□□ 0.68
Ifnb1P01575 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ifnb1P01575 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.31■□□□□ 0.68
Ifnb1P01575 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ifnb1P01575 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
Ifnb1P01575 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Ifnb1P01575 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ifnb1P01575 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Ifnb1P01575 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ifnb1P01575 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ifnb1P01575 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ifnb1P01575 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ifnb1P01575 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ifnb1P01575 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
Ifnb1P01575 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.3■□□□□ 0.68
Ifnb1P01575 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.3■□□□□ 0.68
Ifnb1P01575 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ifnb1P01575 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ifnb1P01575 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ifnb1P01575 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ifnb1P01575 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ifnb1P01575 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ifnb1P01575 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ifnb1P01575 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ifnb1P01575 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ifnb1P01575 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ifnb1P01575 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ifnb1P01575 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ifnb1P01575 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.29■□□□□ 0.68
Ifnb1P01575 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ifnb1P01575 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ifnb1P01575 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.29■□□□□ 0.68
Ifnb1P01575 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ifnb1P01575 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ifnb1P01575 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ifnb1P01575 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ifnb1P01575 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ifnb1P01575 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ifnb1P01575 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ifnb1P01575 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms