Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.02■□□□□ 0.8
CPNE3O75131 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE3O75131 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.02■□□□□ 0.8
CPNE3O75131 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.02■□□□□ 0.8
CPNE3O75131 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE3O75131 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE3O75131 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CPNE3O75131 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPNE3O75131 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.02■□□□□ 0.79
CPNE3O75131 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
CPNE3O75131 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPNE3O75131 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.02■□□□□ 0.79
CPNE3O75131 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE3O75131 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.01■□□□□ 0.79
CPNE3O75131 AC007375.3-201ENST00000600936 2314 ntBASIC20.01■□□□□ 0.79
CPNE3O75131 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE3O75131 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE3O75131 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.01■□□□□ 0.79
CPNE3O75131 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.01■□□□□ 0.79
CPNE3O75131 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.01■□□□□ 0.79
CPNE3O75131 AC105036.2-201ENST00000569468 176 ntBASIC20.01■□□□□ 0.79
CPNE3O75131 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CPNE3O75131 AC092053.2-201ENST00000640557 1818 ntBASIC20.01■□□□□ 0.79
CPNE3O75131 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE3O75131 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CPNE3O75131 KRT16P2-201ENST00000414673 1423 ntBASIC20.01■□□□□ 0.79
CPNE3O75131 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE3O75131 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE3O75131 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20■□□□□ 0.79
CPNE3O75131 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE3O75131 CYP2T1P-201ENST00000432607 1285 ntBASIC20■□□□□ 0.79
CPNE3O75131 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20■□□□□ 0.79
CPNE3O75131 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CPNE3O75131 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20■□□□□ 0.79
CPNE3O75131 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CPNE3O75131 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20■□□□□ 0.79
CPNE3O75131 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE3O75131 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20■□□□□ 0.79
CPNE3O75131 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE3O75131 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE3O75131 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CPNE3O75131 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPNE3O75131 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE3O75131 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE3O75131 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE3O75131 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.99■□□□□ 0.79
CPNE3O75131 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.99■□□□□ 0.79
CPNE3O75131 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE3O75131 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.99■□□□□ 0.79
CPNE3O75131 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.99■□□□□ 0.79
CPNE3O75131 AC127496.7-201ENST00000625110 1798 ntBASIC19.99■□□□□ 0.79
CPNE3O75131 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE3O75131 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.99■□□□□ 0.79
CPNE3O75131 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.99■□□□□ 0.79
CPNE3O75131 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE3O75131 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.99■□□□□ 0.79
CPNE3O75131 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.99■□□□□ 0.79
CPNE3O75131 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.99■□□□□ 0.79
CPNE3O75131 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE3O75131 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.99■□□□□ 0.79
CPNE3O75131 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE3O75131 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.99■□□□□ 0.79
CPNE3O75131 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE3O75131 AL121603.2-201ENST00000557373 2117 ntBASIC19.99■□□□□ 0.79
CPNE3O75131 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE3O75131 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE3O75131 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE3O75131 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE3O75131 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE3O75131 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE3O75131 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE3O75131 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE3O75131 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE3O75131 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.98■□□□□ 0.79
CPNE3O75131 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CPNE3O75131 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CPNE3O75131 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE3O75131 AC068338.2-201ENST00000563278 1430 ntBASIC19.98■□□□□ 0.79
CPNE3O75131 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPNE3O75131 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CPNE3O75131 GUSBP5-202ENST00000510805 1989 ntBASIC19.97■□□□□ 0.79
CPNE3O75131 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE3O75131 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CPNE3O75131 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE3O75131 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CPNE3O75131 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
CPNE3O75131 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.97■□□□□ 0.79
CPNE3O75131 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.97■□□□□ 0.79
CPNE3O75131 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.97■□□□□ 0.79
CPNE3O75131 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.97■□□□□ 0.79
CPNE3O75131 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.97■□□□□ 0.79
CPNE3O75131 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.97■□□□□ 0.79
CPNE3O75131 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.97■□□□□ 0.79
CPNE3O75131 AC008694.1-202ENST00000636953 945 ntBASIC19.97■□□□□ 0.79
CPNE3O75131 AC003102.1-202ENST00000563394 1796 ntBASIC19.97■□□□□ 0.79
CPNE3O75131 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.97■□□□□ 0.79
CPNE3O75131 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.97■□□□□ 0.79
CPNE3O75131 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE3O75131 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.96■□□□□ 0.79
CPNE3O75131 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms