Protein–RNA interactions for Protein: O35906

Spib, Transcription factor Spi-B, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpibO35906 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SpibO35906 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SpibO35906 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
SpibO35906 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SpibO35906 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SpibO35906 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SpibO35906 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SpibO35906 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.31■□□□□ 0.84
SpibO35906 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SpibO35906 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SpibO35906 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SpibO35906 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SpibO35906 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SpibO35906 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SpibO35906 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.3■□□□□ 0.84
SpibO35906 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SpibO35906 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SpibO35906 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SpibO35906 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SpibO35906 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
SpibO35906 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SpibO35906 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.3■□□□□ 0.84
SpibO35906 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SpibO35906 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SpibO35906 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SpibO35906 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SpibO35906 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SpibO35906 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SpibO35906 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SpibO35906 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SpibO35906 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SpibO35906 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SpibO35906 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SpibO35906 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.29■□□□□ 0.84
SpibO35906 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SpibO35906 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.29■□□□□ 0.84
SpibO35906 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SpibO35906 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.29■□□□□ 0.84
SpibO35906 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.29■□□□□ 0.84
SpibO35906 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SpibO35906 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SpibO35906 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SpibO35906 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SpibO35906 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SpibO35906 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SpibO35906 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SpibO35906 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SpibO35906 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SpibO35906 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SpibO35906 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SpibO35906 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SpibO35906 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SpibO35906 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SpibO35906 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SpibO35906 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.27■□□□□ 0.84
SpibO35906 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SpibO35906 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SpibO35906 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SpibO35906 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.27■□□□□ 0.84
SpibO35906 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.27■□□□□ 0.84
SpibO35906 Gm6433-201ENSMUST00000118634 875 ntBASIC20.27■□□□□ 0.84
SpibO35906 Mir6349-201ENSMUST00000184059 97 ntBASIC20.27■□□□□ 0.84
SpibO35906 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SpibO35906 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SpibO35906 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SpibO35906 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SpibO35906 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.27■□□□□ 0.83
SpibO35906 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SpibO35906 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SpibO35906 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.26■□□□□ 0.83
SpibO35906 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SpibO35906 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SpibO35906 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SpibO35906 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SpibO35906 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SpibO35906 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SpibO35906 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SpibO35906 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SpibO35906 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SpibO35906 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SpibO35906 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SpibO35906 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.25■□□□□ 0.83
SpibO35906 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SpibO35906 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SpibO35906 Gm10231-201ENSMUST00000181584 441 ntBASIC20.25■□□□□ 0.83
SpibO35906 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SpibO35906 Gm10175-202ENSMUST00000208752 441 ntBASIC20.25■□□□□ 0.83
SpibO35906 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.25■□□□□ 0.83
SpibO35906 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SpibO35906 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SpibO35906 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SpibO35906 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SpibO35906 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SpibO35906 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SpibO35906 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SpibO35906 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SpibO35906 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SpibO35906 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SpibO35906 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.24■□□□□ 0.83
SpibO35906 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms