Protein–RNA interactions for Protein: A6NCL1

GMNC, Geminin coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMNCA6NCL1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GMNCA6NCL1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.92■□□□□ 0.94
GMNCA6NCL1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
GMNCA6NCL1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GMNCA6NCL1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GMNCA6NCL1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
GMNCA6NCL1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GMNCA6NCL1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GMNCA6NCL1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GMNCA6NCL1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
GMNCA6NCL1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GMNCA6NCL1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.91■□□□□ 0.94
GMNCA6NCL1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
GMNCA6NCL1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GMNCA6NCL1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.91■□□□□ 0.94
GMNCA6NCL1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
GMNCA6NCL1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GMNCA6NCL1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GMNCA6NCL1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GMNCA6NCL1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GMNCA6NCL1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GMNCA6NCL1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.9■□□□□ 0.94
GMNCA6NCL1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
GMNCA6NCL1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GMNCA6NCL1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GMNCA6NCL1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GMNCA6NCL1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GMNCA6NCL1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GMNCA6NCL1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
GMNCA6NCL1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
GMNCA6NCL1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.9■□□□□ 0.94
GMNCA6NCL1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.9■□□□□ 0.94
GMNCA6NCL1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.9■□□□□ 0.94
GMNCA6NCL1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.9■□□□□ 0.94
GMNCA6NCL1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GMNCA6NCL1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.9■□□□□ 0.94
GMNCA6NCL1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GMNCA6NCL1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GMNCA6NCL1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GMNCA6NCL1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GMNCA6NCL1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GMNCA6NCL1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
GMNCA6NCL1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GMNCA6NCL1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GMNCA6NCL1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.89■□□□□ 0.93
GMNCA6NCL1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.89■□□□□ 0.93
GMNCA6NCL1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
GMNCA6NCL1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
GMNCA6NCL1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GMNCA6NCL1 AC121338.2-201ENST00000622535 1744 ntBASIC20.89■□□□□ 0.93
GMNCA6NCL1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GMNCA6NCL1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GMNCA6NCL1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GMNCA6NCL1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GMNCA6NCL1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
GMNCA6NCL1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.89■□□□□ 0.93
GMNCA6NCL1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.88■□□□□ 0.93
GMNCA6NCL1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GMNCA6NCL1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
GMNCA6NCL1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GMNCA6NCL1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GMNCA6NCL1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GMNCA6NCL1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GMNCA6NCL1 AC003102.1-202ENST00000563394 1796 ntBASIC20.88■□□□□ 0.93
GMNCA6NCL1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GMNCA6NCL1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.88■□□□□ 0.93
GMNCA6NCL1 AC139795.1-202ENST00000500444 432 ntBASIC20.88■□□□□ 0.93
GMNCA6NCL1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GMNCA6NCL1 U85056.1-201ENST00000616429 682 ntBASIC20.88■□□□□ 0.93
GMNCA6NCL1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GMNCA6NCL1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GMNCA6NCL1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GMNCA6NCL1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
GMNCA6NCL1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.88■□□□□ 0.93
GMNCA6NCL1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GMNCA6NCL1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GMNCA6NCL1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GMNCA6NCL1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GMNCA6NCL1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.87■□□□□ 0.93
GMNCA6NCL1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
GMNCA6NCL1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
GMNCA6NCL1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GMNCA6NCL1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GMNCA6NCL1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
GMNCA6NCL1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.87■□□□□ 0.93
GMNCA6NCL1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GMNCA6NCL1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.87■□□□□ 0.93
GMNCA6NCL1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GMNCA6NCL1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
GMNCA6NCL1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GMNCA6NCL1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GMNCA6NCL1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GMNCA6NCL1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
GMNCA6NCL1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.86■□□□□ 0.93
GMNCA6NCL1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GMNCA6NCL1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.86■□□□□ 0.93
GMNCA6NCL1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.86■□□□□ 0.93
GMNCA6NCL1 NTF6A-201ENST00000591175 560 ntBASIC20.86■□□□□ 0.93
GMNCA6NCL1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
GMNCA6NCL1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms