Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-2A0A0B4J237 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV8-2A0A0B4J237 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
TRAV8-2A0A0B4J237 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 AC005224.4-201ENST00000583262 1652 ntBASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 MIR939-201ENST00000401314 82 ntBASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 AF213884.3-201ENST00000563833 479 ntBASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 AL355001.2-201ENST00000620617 1191 ntBASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 RASA4CP-201ENST00000424092 1398 ntBASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-2A0A0B4J237 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 AL031432.3-201ENST00000607698 485 ntBASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-2A0A0B4J237 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 BX005040.4-201ENST00000637145 1518 ntBASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 AL157384.1-201ENST00000445995 2473 ntBASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 MIR572-201ENST00000384983 95 ntBASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAV8-2A0A0B4J237 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
TRAV8-2A0A0B4J237 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV8-2A0A0B4J237 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV8-2A0A0B4J237 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-2A0A0B4J237 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-2A0A0B4J237 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.83■□□□□ 0.12
TRAV8-2A0A0B4J237 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-2A0A0B4J237 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV8-2A0A0B4J237 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-2A0A0B4J237 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV8-2A0A0B4J237 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-2A0A0B4J237 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-2A0A0B4J237 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-2A0A0B4J237 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV8-2A0A0B4J237 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRAV8-2A0A0B4J237 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRAV8-2A0A0B4J237 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV8-2A0A0B4J237 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-2A0A0B4J237 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV8-2A0A0B4J237 AL136967.2-201ENST00000623968 743 ntBASIC15.82■□□□□ 0.12
TRAV8-2A0A0B4J237 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms