Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv16A0A0B4J1H3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm12821-201ENSMUST00000120022 600 ntBASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm21956-201ENSMUST00000179946 522 ntBASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Gm26833-201ENSMUST00000180899 440 ntBASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trbv16A0A0B4J1H3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Trbv16A0A0B4J1H3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trbv16A0A0B4J1H3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.27□□□□□ -0.28
Trbv16A0A0B4J1H3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Trbv16A0A0B4J1H3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Gm38205-201ENSMUST00000192243 258 ntBASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trbv16A0A0B4J1H3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trbv16A0A0B4J1H3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Trbv16A0A0B4J1H3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv16A0A0B4J1H3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv16A0A0B4J1H3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv16A0A0B4J1H3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv16A0A0B4J1H3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv16A0A0B4J1H3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.25□□□□□ -0.29
Trbv16A0A0B4J1H3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv16A0A0B4J1H3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.25□□□□□ -0.29
Trbv16A0A0B4J1H3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv16A0A0B4J1H3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv16A0A0B4J1H3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trbv16A0A0B4J1H3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms