Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PXN-202ENST00000267257 3835 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 LSM3-201ENST00000306024 3815 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 PXN-206ENST00000458477 3807 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 F7-202ENST00000375581 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 MRPS18B-206ENST00000259873 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 IQSEC1-205ENST00000618604 3744 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 CALD1-203ENST00000393118 4281 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 TTC8-205ENST00000358622 2297 ntTSL 5 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 RBM23-215ENST00000555209 2278 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 ZNF544-215ENST00000599953 2274 ntTSL 5 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 FAM49A-202ENST00000406434 1386 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 WDR33-202ENST00000393006 3574 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 SERPINA10-202ENST00000393096 2451 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 SEC61A1-202ENST00000424880 3238 ntTSL 2 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 FKBP9-212ENST00000490776 2699 ntTSL 2 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 CSDE1-217ENST00000534699 2667 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 ADAM20P1-201ENST00000320746 2326 ntBASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 SEMA6D-203ENST00000355997 5908 ntTSL 5 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 HPCAL4-202ENST00000612703 4436 ntTSL 2 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 PTGER4P2-CDK2AP2P2-201ENST00000619442 3123 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 GGA3-201ENST00000537686 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 TFAP2A-203ENST00000379613 3317 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 TXNDC15-201ENST00000358387 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 CTAGE6-201ENST00000470691 2608 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 TGIF2LX-201ENST00000283891 906 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 ENTPD1-AS1-209ENST00000452728 858 ntTSL 3 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 CEACAM22P-203ENST00000455455 545 ntTSL 4 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 AL158071.3-201ENST00000457976 506 ntTSL 2 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 ACA64.3-201ENST00000459613 127 ntBASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 AC097460.1-202ENST00000507494 769 ntTSL 5 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 AC097501.1-201ENST00000512911 658 ntTSL 3 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 AC023078.4-201ENST00000531736 961 ntBASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 AP000866.4-201ENST00000533974 448 ntBASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 AC117498.1-201ENST00000548742 713 ntTSL 2 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 TGIF2LX-202ENST00000561129 928 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 ASIP-202ENST00000568305 610 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 AC136944.3-201ENST00000568520 554 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 NAA60-220ENST00000573580 758 ntTSL 4 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 AC130343.1-201ENST00000576540 459 ntTSL 3 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 RN7SL615P-201ENST00000584065 298 ntBASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 AC046185.2-201ENST00000603263 413 ntBASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 SPRY4-IT1_1.1-201ENST00000611334 91 ntBASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 AC133065.5-201ENST00000618667 630 ntBASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 MIR6876-201ENST00000622618 73 ntBASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 AC115618.3-201ENST00000623114 425 ntBASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 DNASE1L3-206ENST00000483681 2099 ntTSL 5 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 TTC25-201ENST00000377540 2255 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 SMPD4P1-201ENST00000416717 2263 ntBASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 AC040160.1-201ENST00000573063 2677 ntBASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 ANKEF1-202ENST00000378392 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 IL6-204ENST00000404625 1527 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 DLST-202ENST00000334220 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 USP6NL-202ENST00000379237 4546 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 ZNF723-201ENST00000600766 2400 ntBASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 HAL-201ENST00000261208 3913 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
NPIPA3F8WFD2 POLH-202ENST00000372236 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 DENND2D-201ENST00000357640 2077 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 C10orf67-201ENST00000323327 2799 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 PRC1-202ENST00000394249 3034 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 COL10A1-202ENST00000327673 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 DDX10-201ENST00000322536 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 PTGS1-205ENST00000540753 5375 ntTSL 2 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 RASGRP4-219ENST00000618320 3313 ntTSL 2 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 DCK-203ENST00000504730 2401 ntTSL 3 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 OR7C1-201ENST00000248073 1066 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 CRYGB-201ENST00000260988 641 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 OR4C50P-201ENST00000330155 930 ntBASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 KRTAP21-1-201ENST00000335093 599 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 DUSP19-201ENST00000342619 1117 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 SLAMF8-202ENST00000368104 1038 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 IGHV1-69-201ENST00000390633 412 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 AL137792.1-201ENST00000399029 557 ntBASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 NMNAT1-202ENST00000403197 1094 ntTSL 2 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 AL080276.1-201ENST00000405959 247 ntBASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 AP000344.1-203ENST00000426024 163 ntBASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 ZNF175-202ENST00000436511 488 ntTSL 2 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 AL590483.1-201ENST00000441338 468 ntTSL 3 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 PGM5P4-AS1-203ENST00000446595 739 ntTSL 2 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 AL359873.1-201ENST00000447908 764 ntTSL 3 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 AC016638.1-201ENST00000467688 553 ntBASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 TM4SF18-203ENST00000470080 907 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 RN7SL364P-201ENST00000473668 272 ntBASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 RN7SL679P-201ENST00000497096 304 ntBASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 AC025773.1-201ENST00000513859 559 ntTSL 4 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 BIN3-207ENST00000520292 775 ntTSL 5 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 LYVE1-203ENST00000529598 936 ntTSL 2 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 ELOCP22-201ENST00000529735 334 ntBASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 RN7SL663P-201ENST00000578592 299 ntBASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 AC006441.2-201ENST00000580084 302 ntBASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 RN7SL498P-201ENST00000583650 298 ntBASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 IK-211ENST00000610522 737 ntTSL 5 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 Metazoa_SRP.184-201ENST00000619339 258 ntBASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 AL356585.1-201ENST00000624447 897 ntBASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 SEMA4G-205ENST00000517724 2675 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 LIN54-203ENST00000446851 4083 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 CFAP65-207ENST00000441968 3416 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
NPIPA3F8WFD2 C12orf66-202ENST00000398055 4151 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 240.6 ms