Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
R3HCC1Q9Y3T6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.8■■□□□ 1.4
R3HCC1Q9Y3T6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
R3HCC1Q9Y3T6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
R3HCC1Q9Y3T6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.8■■□□□ 1.4
R3HCC1Q9Y3T6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
R3HCC1Q9Y3T6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
R3HCC1Q9Y3T6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.8■■□□□ 1.4
R3HCC1Q9Y3T6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
R3HCC1Q9Y3T6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
R3HCC1Q9Y3T6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
R3HCC1Q9Y3T6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 OR2I1P-207ENST00000453522 948 ntBASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 AF213884.3-201ENST00000563833 479 ntBASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 AC126544.1-201ENST00000580842 1059 ntBASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 Z98882.1-201ENST00000622160 2253 ntBASIC23.79■■□□□ 1.4
R3HCC1Q9Y3T6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
R3HCC1Q9Y3T6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
R3HCC1Q9Y3T6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.78■■□□□ 1.4
R3HCC1Q9Y3T6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
R3HCC1Q9Y3T6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.78■■□□□ 1.4
R3HCC1Q9Y3T6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
R3HCC1Q9Y3T6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
R3HCC1Q9Y3T6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
R3HCC1Q9Y3T6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
R3HCC1Q9Y3T6 AC091305.1-201ENST00000479476 895 ntBASIC23.78■■□□□ 1.4
R3HCC1Q9Y3T6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.78■■□□□ 1.4
R3HCC1Q9Y3T6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.78■■□□□ 1.4
R3HCC1Q9Y3T6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
R3HCC1Q9Y3T6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.78■■□□□ 1.4
R3HCC1Q9Y3T6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.78■■□□□ 1.4
R3HCC1Q9Y3T6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.77■■□□□ 1.4
R3HCC1Q9Y3T6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
R3HCC1Q9Y3T6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
R3HCC1Q9Y3T6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
R3HCC1Q9Y3T6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
R3HCC1Q9Y3T6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
R3HCC1Q9Y3T6 AP001330.3-201ENST00000520123 633 ntBASIC23.77■■□□□ 1.4
R3HCC1Q9Y3T6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.77■■□□□ 1.4
R3HCC1Q9Y3T6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
R3HCC1Q9Y3T6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
R3HCC1Q9Y3T6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
R3HCC1Q9Y3T6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
R3HCC1Q9Y3T6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
R3HCC1Q9Y3T6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
R3HCC1Q9Y3T6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
R3HCC1Q9Y3T6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
R3HCC1Q9Y3T6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
R3HCC1Q9Y3T6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
R3HCC1Q9Y3T6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
R3HCC1Q9Y3T6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
R3HCC1Q9Y3T6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
R3HCC1Q9Y3T6 AC099791.1-201ENST00000416440 715 ntBASIC23.76■■□□□ 1.39
R3HCC1Q9Y3T6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.76■■□□□ 1.39
R3HCC1Q9Y3T6 SLC47A1P1-202ENST00000449666 945 ntBASIC23.76■■□□□ 1.39
R3HCC1Q9Y3T6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.76■■□□□ 1.39
R3HCC1Q9Y3T6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
R3HCC1Q9Y3T6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
R3HCC1Q9Y3T6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.76■■□□□ 1.39
R3HCC1Q9Y3T6 RASA4CP-201ENST00000424092 1398 ntBASIC23.76■■□□□ 1.39
R3HCC1Q9Y3T6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.76■■□□□ 1.39
R3HCC1Q9Y3T6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
R3HCC1Q9Y3T6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 MIR939-201ENST00000401314 82 ntBASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 SUDS3P1-201ENST00000505831 966 ntBASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 AFG3L1P-217ENST00000557444 2447 ntBASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
R3HCC1Q9Y3T6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
R3HCC1Q9Y3T6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
R3HCC1Q9Y3T6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
R3HCC1Q9Y3T6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms