Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 AC010536.3-201ENST00000620306 533 ntBASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 KRT16P2-201ENST00000414673 1423 ntBASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPHK1Q9NYA1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPHK1Q9NYA1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.23■□□□□ 0.83
SPHK1Q9NYA1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.23■□□□□ 0.83
SPHK1Q9NYA1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
SPHK1Q9NYA1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPHK1Q9NYA1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.23■□□□□ 0.83
SPHK1Q9NYA1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.23■□□□□ 0.83
SPHK1Q9NYA1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPHK1Q9NYA1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPHK1Q9NYA1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPHK1Q9NYA1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SPHK1Q9NYA1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPHK1Q9NYA1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SPHK1Q9NYA1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPHK1Q9NYA1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPHK1Q9NYA1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPHK1Q9NYA1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPHK1Q9NYA1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SPHK1Q9NYA1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.22■□□□□ 0.83
SPHK1Q9NYA1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.22■□□□□ 0.83
SPHK1Q9NYA1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.22■□□□□ 0.83
SPHK1Q9NYA1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPHK1Q9NYA1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPHK1Q9NYA1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPHK1Q9NYA1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPHK1Q9NYA1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.21■□□□□ 0.83
SPHK1Q9NYA1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPHK1Q9NYA1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.21■□□□□ 0.83
SPHK1Q9NYA1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPHK1Q9NYA1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SPHK1Q9NYA1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.21■□□□□ 0.83
SPHK1Q9NYA1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.21■□□□□ 0.83
SPHK1Q9NYA1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.21■□□□□ 0.83
SPHK1Q9NYA1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPHK1Q9NYA1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.21■□□□□ 0.83
SPHK1Q9NYA1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SPHK1Q9NYA1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.21■□□□□ 0.83
SPHK1Q9NYA1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SPHK1Q9NYA1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPHK1Q9NYA1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SPHK1Q9NYA1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPHK1Q9NYA1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.2■□□□□ 0.82
SPHK1Q9NYA1 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.2■□□□□ 0.82
SPHK1Q9NYA1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPHK1Q9NYA1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPHK1Q9NYA1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.2■□□□□ 0.82
SPHK1Q9NYA1 CNN2P6-201ENST00000439038 900 ntBASIC20.2■□□□□ 0.82
SPHK1Q9NYA1 AC026185.1-201ENST00000445748 174 ntBASIC20.2■□□□□ 0.82
SPHK1Q9NYA1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.2■□□□□ 0.82
SPHK1Q9NYA1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.2■□□□□ 0.82
SPHK1Q9NYA1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPHK1Q9NYA1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPHK1Q9NYA1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPHK1Q9NYA1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPHK1Q9NYA1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPHK1Q9NYA1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.2■□□□□ 0.82
SPHK1Q9NYA1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPHK1Q9NYA1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms