Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PARPBPQ9NWS1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PARPBPQ9NWS1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.71■□□□□ 0.59
PARPBPQ9NWS1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PARPBPQ9NWS1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PARPBPQ9NWS1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PARPBPQ9NWS1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PARPBPQ9NWS1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.71■□□□□ 0.59
PARPBPQ9NWS1 AC010141.2-201ENST00000452426 721 ntBASIC18.71■□□□□ 0.59
PARPBPQ9NWS1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.71■□□□□ 0.59
PARPBPQ9NWS1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PARPBPQ9NWS1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PARPBPQ9NWS1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.71■□□□□ 0.59
PARPBPQ9NWS1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PARPBPQ9NWS1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.71■□□□□ 0.59
PARPBPQ9NWS1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 KRT18P11-201ENST00000435214 1283 ntBASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 AC137761.2-201ENST00000561729 223 ntBASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 AC145350.3-201ENST00000569033 163 ntBASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PARPBPQ9NWS1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PARPBPQ9NWS1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.69■□□□□ 0.58
PARPBPQ9NWS1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.69■□□□□ 0.58
PARPBPQ9NWS1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.69■□□□□ 0.58
PARPBPQ9NWS1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PARPBPQ9NWS1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PARPBPQ9NWS1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PARPBPQ9NWS1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PARPBPQ9NWS1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PARPBPQ9NWS1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PARPBPQ9NWS1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.69■□□□□ 0.58
PARPBPQ9NWS1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PARPBPQ9NWS1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.69■□□□□ 0.58
PARPBPQ9NWS1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PARPBPQ9NWS1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PARPBPQ9NWS1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PARPBPQ9NWS1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PARPBPQ9NWS1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 AC016769.1-201ENST00000409132 1010 ntBASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 AC244015.2-201ENST00000616358 1861 ntBASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PARPBPQ9NWS1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 AC022517.1-201ENST00000592429 346 ntBASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PARPBPQ9NWS1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PARPBPQ9NWS1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PARPBPQ9NWS1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PARPBPQ9NWS1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms