Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8VDP2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Q8VDP2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8VDP2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Q8VDP2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q8VDP2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q8VDP2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q8VDP2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Q8VDP2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q8VDP2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q8VDP2 Gm45444-201ENSMUST00000211394 898 ntBASIC17.92■□□□□ 0.46
Q8VDP2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.92■□□□□ 0.46
Q8VDP2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Q8VDP2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q8VDP2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q8VDP2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q8VDP2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Q8VDP2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Q8VDP2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8VDP2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Q8VDP2 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.91■□□□□ 0.46
Q8VDP2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8VDP2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Q8VDP2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8VDP2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8VDP2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8VDP2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8VDP2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q8VDP2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
Q8VDP2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Q8VDP2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8VDP2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Q8VDP2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8VDP2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8VDP2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8VDP2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Q8VDP2 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.9■□□□□ 0.46
Q8VDP2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8VDP2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Q8VDP2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8VDP2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Q8VDP2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8VDP2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Q8VDP2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Q8VDP2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q8VDP2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Q8VDP2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Q8VDP2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Q8VDP2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Q8VDP2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.89■□□□□ 0.45
Q8VDP2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q8VDP2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q8VDP2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q8VDP2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.89■□□□□ 0.45
Q8VDP2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Q8VDP2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q8VDP2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.89■□□□□ 0.45
Q8VDP2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Q8VDP2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Q8VDP2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q8VDP2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q8VDP2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q8VDP2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q8VDP2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Q8VDP2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q8VDP2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Q8VDP2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q8VDP2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Q8VDP2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.88■□□□□ 0.45
Q8VDP2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q8VDP2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q8VDP2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q8VDP2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Q8VDP2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q8VDP2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q8VDP2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Q8VDP2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Q8VDP2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Q8VDP2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Q8VDP2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Q8VDP2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Q8VDP2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q8VDP2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Q8VDP2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.87■□□□□ 0.45
Q8VDP2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.87■□□□□ 0.45
Q8VDP2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q8VDP2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q8VDP2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q8VDP2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Q8VDP2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q8VDP2 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.87■□□□□ 0.45
Q8VDP2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Q8VDP2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.86■□□□□ 0.45
Q8VDP2 Gm15820-201ENSMUST00000201566 728 ntBASIC17.86■□□□□ 0.45
Q8VDP2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.86■□□□□ 0.45
Q8VDP2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Q8VDP2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Q8VDP2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Q8VDP2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Q8VDP2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms