Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM42Q8IWZ5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 OR2I1P-207ENST00000453522 948 ntBASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM42Q8IWZ5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM42Q8IWZ5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM42Q8IWZ5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM42Q8IWZ5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.84■□□□□ 0.93
TRIM42Q8IWZ5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM42Q8IWZ5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
TRIM42Q8IWZ5 MIR6724-1-201ENST00000616420 92 ntBASIC20.84■□□□□ 0.93
TRIM42Q8IWZ5 MIR6724-2-201ENST00000616483 92 ntBASIC20.84■□□□□ 0.93
TRIM42Q8IWZ5 MIR6724-4-201ENST00000617390 92 ntBASIC20.84■□□□□ 0.93
TRIM42Q8IWZ5 MIR6724-3-201ENST00000622482 92 ntBASIC20.84■□□□□ 0.93
TRIM42Q8IWZ5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM42Q8IWZ5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM42Q8IWZ5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.84■□□□□ 0.93
TRIM42Q8IWZ5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRIM42Q8IWZ5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM42Q8IWZ5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
TRIM42Q8IWZ5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM42Q8IWZ5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM42Q8IWZ5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.83■□□□□ 0.93
TRIM42Q8IWZ5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
TRIM42Q8IWZ5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM42Q8IWZ5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TRIM42Q8IWZ5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM42Q8IWZ5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
TRIM42Q8IWZ5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM42Q8IWZ5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM42Q8IWZ5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM42Q8IWZ5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM42Q8IWZ5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM42Q8IWZ5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
TRIM42Q8IWZ5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM42Q8IWZ5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM42Q8IWZ5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM42Q8IWZ5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM42Q8IWZ5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM42Q8IWZ5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TRIM42Q8IWZ5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM42Q8IWZ5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM42Q8IWZ5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM42Q8IWZ5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM42Q8IWZ5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM42Q8IWZ5 AP004607.7-201ENST00000527152 1677 ntBASIC20.81■□□□□ 0.92
TRIM42Q8IWZ5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
TRIM42Q8IWZ5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM42Q8IWZ5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM42Q8IWZ5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM42Q8IWZ5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM42Q8IWZ5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM42Q8IWZ5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM42Q8IWZ5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM42Q8IWZ5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM42Q8IWZ5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM42Q8IWZ5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM42Q8IWZ5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM42Q8IWZ5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TRIM42Q8IWZ5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 AC006455.2-201ENST00000429931 906 ntBASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 AC073314.1-201ENST00000568729 2216 ntBASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TRIM42Q8IWZ5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
TRIM42Q8IWZ5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM42Q8IWZ5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TRIM42Q8IWZ5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms