Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h2aaQ8CGP4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Hist1h2aaQ8CGP4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h2aaQ8CGP4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.34■□□□□ 0.37
Hist1h2aaQ8CGP4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.34■□□□□ 0.37
Hist1h2aaQ8CGP4 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.34■□□□□ 0.37
Hist1h2aaQ8CGP4 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.34■□□□□ 0.37
Hist1h2aaQ8CGP4 Gm10033-202ENSMUST00000211874 928 ntBASIC17.34■□□□□ 0.37
Hist1h2aaQ8CGP4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Hist1h2aaQ8CGP4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h2aaQ8CGP4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h2aaQ8CGP4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h2aaQ8CGP4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hist1h2aaQ8CGP4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hist1h2aaQ8CGP4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hist1h2aaQ8CGP4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Hist1h2aaQ8CGP4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hist1h2aaQ8CGP4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hist1h2aaQ8CGP4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hist1h2aaQ8CGP4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hist1h2aaQ8CGP4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hist1h2aaQ8CGP4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hist1h2aaQ8CGP4 AV356131-201ENSMUST00000206201 750 ntBASIC17.33■□□□□ 0.36
Hist1h2aaQ8CGP4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hist1h2aaQ8CGP4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hist1h2aaQ8CGP4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Hist1h2aaQ8CGP4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.33■□□□□ 0.36
Hist1h2aaQ8CGP4 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.33■□□□□ 0.36
Hist1h2aaQ8CGP4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.33■□□□□ 0.36
Hist1h2aaQ8CGP4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hist1h2aaQ8CGP4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h2aaQ8CGP4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h2aaQ8CGP4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h2aaQ8CGP4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h2aaQ8CGP4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h2aaQ8CGP4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h2aaQ8CGP4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h2aaQ8CGP4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.32■□□□□ 0.36
Hist1h2aaQ8CGP4 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.32■□□□□ 0.36
Hist1h2aaQ8CGP4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h2aaQ8CGP4 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.32■□□□□ 0.36
Hist1h2aaQ8CGP4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.32■□□□□ 0.36
Hist1h2aaQ8CGP4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h2aaQ8CGP4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h2aaQ8CGP4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hist1h2aaQ8CGP4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.32■□□□□ 0.36
Hist1h2aaQ8CGP4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h2aaQ8CGP4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h2aaQ8CGP4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h2aaQ8CGP4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h2aaQ8CGP4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.31■□□□□ 0.36
Hist1h2aaQ8CGP4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h2aaQ8CGP4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h2aaQ8CGP4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.31■□□□□ 0.36
Hist1h2aaQ8CGP4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.31■□□□□ 0.36
Hist1h2aaQ8CGP4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h2aaQ8CGP4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hist1h2aaQ8CGP4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h2aaQ8CGP4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hist1h2aaQ8CGP4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hist1h2aaQ8CGP4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hist1h2aaQ8CGP4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hist1h2aaQ8CGP4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hist1h2aaQ8CGP4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hist1h2aaQ8CGP4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.29■□□□□ 0.36
Hist1h2aaQ8CGP4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hist1h2aaQ8CGP4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hist1h2aaQ8CGP4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hist1h2aaQ8CGP4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hist1h2aaQ8CGP4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hist1h2aaQ8CGP4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hist1h2aaQ8CGP4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hist1h2aaQ8CGP4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hist1h2aaQ8CGP4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hist1h2aaQ8CGP4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hist1h2aaQ8CGP4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hist1h2aaQ8CGP4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hist1h2aaQ8CGP4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Hist1h2aaQ8CGP4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms