Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
PRPF40BQ6NWY9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PRPF40BQ6NWY9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.34■■□□□ 1.81
PRPF40BQ6NWY9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PRPF40BQ6NWY9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PRPF40BQ6NWY9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRPF40BQ6NWY9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
PRPF40BQ6NWY9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC26.34■■□□□ 1.81
PRPF40BQ6NWY9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PRPF40BQ6NWY9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC26.34■■□□□ 1.81
PRPF40BQ6NWY9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
PRPF40BQ6NWY9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.34■■□□□ 1.81
PRPF40BQ6NWY9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.34■■□□□ 1.81
PRPF40BQ6NWY9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRPF40BQ6NWY9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC26.34■■□□□ 1.81
PRPF40BQ6NWY9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRPF40BQ6NWY9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PRPF40BQ6NWY9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRPF40BQ6NWY9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC26.33■■□□□ 1.81
PRPF40BQ6NWY9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PRPF40BQ6NWY9 AC010980.2-201ENST00000587099 1412 ntBASIC26.33■■□□□ 1.81
PRPF40BQ6NWY9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRPF40BQ6NWY9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRPF40BQ6NWY9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PRPF40BQ6NWY9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRPF40BQ6NWY9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC26.33■■□□□ 1.81
PRPF40BQ6NWY9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.33■■□□□ 1.81
PRPF40BQ6NWY9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC26.33■■□□□ 1.81
PRPF40BQ6NWY9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC26.33■■□□□ 1.81
PRPF40BQ6NWY9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC26.33■■□□□ 1.81
PRPF40BQ6NWY9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC26.33■■□□□ 1.81
PRPF40BQ6NWY9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PRPF40BQ6NWY9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC26.33■■□□□ 1.81
PRPF40BQ6NWY9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC26.33■■□□□ 1.8
PRPF40BQ6NWY9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PRPF40BQ6NWY9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
PRPF40BQ6NWY9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
PRPF40BQ6NWY9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
PRPF40BQ6NWY9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PRPF40BQ6NWY9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.32■■□□□ 1.8
PRPF40BQ6NWY9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PRPF40BQ6NWY9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PRPF40BQ6NWY9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PRPF40BQ6NWY9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26.32■■□□□ 1.8
PRPF40BQ6NWY9 AC079834.2-201ENST00000609776 1949 ntBASIC26.31■■□□□ 1.8
PRPF40BQ6NWY9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PRPF40BQ6NWY9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRPF40BQ6NWY9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
PRPF40BQ6NWY9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC26.31■■□□□ 1.8
PRPF40BQ6NWY9 AC127496.7-201ENST00000625110 1798 ntBASIC26.31■■□□□ 1.8
PRPF40BQ6NWY9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRPF40BQ6NWY9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.31■■□□□ 1.8
PRPF40BQ6NWY9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRPF40BQ6NWY9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PRPF40BQ6NWY9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.31■■□□□ 1.8
PRPF40BQ6NWY9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC26.31■■□□□ 1.8
PRPF40BQ6NWY9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRPF40BQ6NWY9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
PRPF40BQ6NWY9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PRPF40BQ6NWY9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
PRPF40BQ6NWY9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PRPF40BQ6NWY9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
PRPF40BQ6NWY9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
PRPF40BQ6NWY9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
PRPF40BQ6NWY9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.3■■□□□ 1.8
PRPF40BQ6NWY9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC26.3■■□□□ 1.8
PRPF40BQ6NWY9 AC120498.10-201ENST00000621827 505 ntBASIC26.3■■□□□ 1.8
PRPF40BQ6NWY9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.3■■□□□ 1.8
PRPF40BQ6NWY9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.3■■□□□ 1.8
PRPF40BQ6NWY9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC26.3■■□□□ 1.8
PRPF40BQ6NWY9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PRPF40BQ6NWY9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC26.29■■□□□ 1.8
PRPF40BQ6NWY9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRPF40BQ6NWY9 AC080038.3-201ENST00000623346 1952 ntBASIC26.29■■□□□ 1.8
PRPF40BQ6NWY9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
PRPF40BQ6NWY9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC26.29■■□□□ 1.8
PRPF40BQ6NWY9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
PRPF40BQ6NWY9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
PRPF40BQ6NWY9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRPF40BQ6NWY9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC26.29■■□□□ 1.8
PRPF40BQ6NWY9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PRPF40BQ6NWY9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
PRPF40BQ6NWY9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PRPF40BQ6NWY9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.29■■□□□ 1.8
PRPF40BQ6NWY9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PRPF40BQ6NWY9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
PRPF40BQ6NWY9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PRPF40BQ6NWY9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC26.28■■□□□ 1.8
PRPF40BQ6NWY9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PRPF40BQ6NWY9 UNC93B4-201ENST00000505679 747 ntBASIC26.28■■□□□ 1.8
PRPF40BQ6NWY9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC26.28■■□□□ 1.8
PRPF40BQ6NWY9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC26.28■■□□□ 1.8
PRPF40BQ6NWY9 AL162412.1-201ENST00000567129 965 ntBASIC26.28■■□□□ 1.8
PRPF40BQ6NWY9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
PRPF40BQ6NWY9 AC008175.2-201ENST00000612840 297 ntBASIC26.28■■□□□ 1.8
PRPF40BQ6NWY9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC26.28■■□□□ 1.8
PRPF40BQ6NWY9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC26.28■■□□□ 1.8
PRPF40BQ6NWY9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PRPF40BQ6NWY9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
PRPF40BQ6NWY9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms