Protein–RNA interactions for Protein: Q3UQI9

Mindy4, Probable ubiquitin carboxyl-terminal hydrolase MINDY-4, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4Q3UQI9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mindy4Q3UQI9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mindy4Q3UQI9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
Mindy4Q3UQI9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mindy4Q3UQI9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mindy4Q3UQI9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.3■□□□□ 0.84
Mindy4Q3UQI9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mindy4Q3UQI9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mindy4Q3UQI9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mindy4Q3UQI9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mindy4Q3UQI9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mindy4Q3UQI9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.29■□□□□ 0.84
Mindy4Q3UQI9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mindy4Q3UQI9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mindy4Q3UQI9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mindy4Q3UQI9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mindy4Q3UQI9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mindy4Q3UQI9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mindy4Q3UQI9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mindy4Q3UQI9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mindy4Q3UQI9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mindy4Q3UQI9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Mindy4Q3UQI9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.29■□□□□ 0.84
Mindy4Q3UQI9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mindy4Q3UQI9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.29■□□□□ 0.84
Mindy4Q3UQI9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Mindy4Q3UQI9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Mindy4Q3UQI9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Mindy4Q3UQI9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mindy4Q3UQI9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Mindy4Q3UQI9 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.28■□□□□ 0.84
Mindy4Q3UQI9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mindy4Q3UQI9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mindy4Q3UQI9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mindy4Q3UQI9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mindy4Q3UQI9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mindy4Q3UQI9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mindy4Q3UQI9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.27■□□□□ 0.84
Mindy4Q3UQI9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mindy4Q3UQI9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mindy4Q3UQI9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mindy4Q3UQI9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mindy4Q3UQI9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Mindy4Q3UQI9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mindy4Q3UQI9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.27■□□□□ 0.84
Mindy4Q3UQI9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Mindy4Q3UQI9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.27■□□□□ 0.84
Mindy4Q3UQI9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mindy4Q3UQI9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mindy4Q3UQI9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Mindy4Q3UQI9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mindy4Q3UQI9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mindy4Q3UQI9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Mindy4Q3UQI9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Mindy4Q3UQI9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mindy4Q3UQI9 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.26■□□□□ 0.83
Mindy4Q3UQI9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.26■□□□□ 0.83
Mindy4Q3UQI9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mindy4Q3UQI9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.26■□□□□ 0.83
Mindy4Q3UQI9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mindy4Q3UQI9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mindy4Q3UQI9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mindy4Q3UQI9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Mindy4Q3UQI9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mindy4Q3UQI9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Mindy4Q3UQI9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mindy4Q3UQI9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mindy4Q3UQI9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mindy4Q3UQI9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Mindy4Q3UQI9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mindy4Q3UQI9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mindy4Q3UQI9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Mindy4Q3UQI9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Mindy4Q3UQI9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.24■□□□□ 0.83
Mindy4Q3UQI9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
Mindy4Q3UQI9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mindy4Q3UQI9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mindy4Q3UQI9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mindy4Q3UQI9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mindy4Q3UQI9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mindy4Q3UQI9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Mindy4Q3UQI9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms