Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h3bP84228 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hist1h3bP84228 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hist1h3bP84228 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h3bP84228 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h3bP84228 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h3bP84228 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h3bP84228 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.15■□□□□ 0.18
Hist1h3bP84228 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h3bP84228 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Hist1h3bP84228 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Hist1h3bP84228 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Hist1h3bP84228 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Hist1h3bP84228 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h3bP84228 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h3bP84228 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h3bP84228 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Hist1h3bP84228 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h3bP84228 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.14■□□□□ 0.17
Hist1h3bP84228 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Hist1h3bP84228 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h3bP84228 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.14■□□□□ 0.17
Hist1h3bP84228 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h3bP84228 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h3bP84228 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h3bP84228 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Hist1h3bP84228 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h3bP84228 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h3bP84228 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h3bP84228 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.13■□□□□ 0.17
Hist1h3bP84228 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.13■□□□□ 0.17
Hist1h3bP84228 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h3bP84228 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.13■□□□□ 0.17
Hist1h3bP84228 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h3bP84228 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h3bP84228 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h3bP84228 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Hist1h3bP84228 Gm42642-201ENSMUST00000200683 355 ntBASIC16.13■□□□□ 0.17
Hist1h3bP84228 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Hist1h3bP84228 Gm5874-201ENSMUST00000096101 508 ntBASIC16.13■□□□□ 0.17
Hist1h3bP84228 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h3bP84228 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.13■□□□□ 0.17
Hist1h3bP84228 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h3bP84228 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Hist1h3bP84228 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.13■□□□□ 0.17
Hist1h3bP84228 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Hist1h3bP84228 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h3bP84228 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h3bP84228 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h3bP84228 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h3bP84228 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h3bP84228 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h3bP84228 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h3bP84228 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.12■□□□□ 0.17
Hist1h3bP84228 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h3bP84228 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h3bP84228 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.12■□□□□ 0.17
Hist1h3bP84228 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Hist1h3bP84228 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h3bP84228 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h3bP84228 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h3bP84228 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hist1h3bP84228 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h3bP84228 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.11■□□□□ 0.17
Hist1h3bP84228 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Hist1h3bP84228 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h3bP84228 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.11■□□□□ 0.17
Hist1h3bP84228 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Hist1h3bP84228 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.1■□□□□ 0.17
Hist1h3bP84228 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hist1h3bP84228 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hist1h3bP84228 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hist1h3bP84228 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hist1h3bP84228 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hist1h3bP84228 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hist1h3bP84228 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hist1h3bP84228 Gm18284-201ENSMUST00000172604 624 ntBASIC16.1■□□□□ 0.17
Hist1h3bP84228 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.1■□□□□ 0.17
Hist1h3bP84228 Gm18671-201ENSMUST00000214826 683 ntBASIC16.1■□□□□ 0.17
Hist1h3bP84228 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.1■□□□□ 0.17
Hist1h3bP84228 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hist1h3bP84228 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms