Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Six5P70178 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six5P70178 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six5P70178 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six5P70178 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six5P70178 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six5P70178 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six5P70178 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Six5P70178 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.22■□□□□ 0.35
Six5P70178 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six5P70178 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.22■□□□□ 0.35
Six5P70178 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Six5P70178 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Six5P70178 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.22■□□□□ 0.35
Six5P70178 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Six5P70178 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Six5P70178 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six5P70178 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six5P70178 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six5P70178 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six5P70178 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six5P70178 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six5P70178 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six5P70178 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six5P70178 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.21■□□□□ 0.35
Six5P70178 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six5P70178 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six5P70178 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six5P70178 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Six5P70178 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Six5P70178 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six5P70178 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Six5P70178 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six5P70178 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Six5P70178 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Six5P70178 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Six5P70178 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six5P70178 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six5P70178 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.2■□□□□ 0.34
Six5P70178 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Six5P70178 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Six5P70178 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.2■□□□□ 0.34
Six5P70178 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.2■□□□□ 0.34
Six5P70178 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six5P70178 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six5P70178 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six5P70178 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six5P70178 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.2■□□□□ 0.34
Six5P70178 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Six5P70178 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Six5P70178 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six5P70178 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six5P70178 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six5P70178 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.19■□□□□ 0.34
Six5P70178 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Six5P70178 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Six5P70178 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six5P70178 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.19■□□□□ 0.34
Six5P70178 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six5P70178 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.19■□□□□ 0.34
Six5P70178 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six5P70178 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Six5P70178 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six5P70178 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six5P70178 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six5P70178 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six5P70178 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six5P70178 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six5P70178 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Six5P70178 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six5P70178 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six5P70178 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six5P70178 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Six5P70178 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six5P70178 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Six5P70178 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Six5P70178 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Six5P70178 Gm12933-201ENSMUST00000120203 872 ntBASIC17.18■□□□□ 0.34
Six5P70178 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.18■□□□□ 0.34
Six5P70178 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.18■□□□□ 0.34
Six5P70178 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six5P70178 Gm6365-201ENSMUST00000054711 744 ntBASIC17.18■□□□□ 0.34
Six5P70178 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.18■□□□□ 0.34
Six5P70178 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six5P70178 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six5P70178 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six5P70178 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.18■□□□□ 0.34
Six5P70178 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Six5P70178 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Six5P70178 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six5P70178 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six5P70178 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Six5P70178 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six5P70178 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six5P70178 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six5P70178 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six5P70178 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.17■□□□□ 0.34
Six5P70178 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Six5P70178 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Six5P70178 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms