Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 SEC28YIL076W 891 nt3.16□□□□□ -1.9
LSM5P40089 GIS2YNL255C 462 nt3.16□□□□□ -1.9
LSM5P40089 YPR027CYPR027C 834 nt3.16□□□□□ -1.9
LSM5P40089 AIM4YBR194W 372 nt3.16□□□□□ -1.9
LSM5P40089 snR42snR42 351 nt3.16□□□□□ -1.9
LSM5P40089 YEL025CYEL025C 3567 nt3.16□□□□□ -1.9
LSM5P40089 YSP2YDR326C 4317 nt3.16□□□□□ -1.9
LSM5P40089 MAK21YDR060W 3078 nt3.16□□□□□ -1.9
LSM5P40089 YAK1YJL141C 2424 nt3.15□□□□□ -1.9
LSM5P40089 CIN8YEL061C 3003 nt3.15□□□□□ -1.9
LSM5P40089 VPS33YLR396C 2076 nt3.15□□□□□ -1.9
LSM5P40089 CBS2YDR197W 1170 nt3.15□□□□□ -1.91
LSM5P40089 tR(UCU)Q1tR(UCU)Q1 73 nt3.15□□□□□ -1.91
LSM5P40089 YBL068W-AYBL068W-A 237 nt3.15□□□□□ -1.91
LSM5P40089 YNL319WYNL319W 441 nt3.15□□□□□ -1.91
LSM5P40089 IPP1YBR011C 864 nt3.15□□□□□ -1.91
LSM5P40089 SPR2YOR214C 711 nt3.15□□□□□ -1.91
LSM5P40089 MED1YPR070W 1701 nt3.15□□□□□ -1.91
LSM5P40089 STN1YDR082W 1485 nt3.15□□□□□ -1.91
LSM5P40089 POL2YNL262W 6669 nt3.15□□□□□ -1.91
LSM5P40089 SLD5YDR489W 885 nt3.14□□□□□ -1.91
LSM5P40089 COX23YHR116W 456 nt3.14□□□□□ -1.91
LSM5P40089 MRPL38YKL170W 417 nt3.14□□□□□ -1.91
LSM5P40089 DYN3YMR299C 939 nt3.14□□□□□ -1.91
LSM5P40089 NET1YJL076W 3570 nt3.14□□□□□ -1.91
LSM5P40089 MIT1YEL007W 2001 nt3.14□□□□□ -1.91
LSM5P40089 YMR018WYMR018W 1545 nt3.14□□□□□ -1.91
LSM5P40089 BMS1YPL217C 3552 nt3.13□□□□□ -1.91
LSM5P40089 GIS4YML006C 2325 nt3.13□□□□□ -1.91
LSM5P40089 ATP16YDL004W 483 nt3.13□□□□□ -1.91
LSM5P40089 tF(GAA)DtF(GAA)D 73 nt3.13□□□□□ -1.91
LSM5P40089 tF(GAA)NtF(GAA)N 73 nt3.13□□□□□ -1.91
LSM5P40089 RMT2YDR465C 1239 nt3.13□□□□□ -1.91
LSM5P40089 EMI1YDR512C 564 nt3.13□□□□□ -1.91
LSM5P40089 USE1YGL098W 738 nt3.13□□□□□ -1.91
LSM5P40089 VEL1YGL258W 621 nt3.13□□□□□ -1.91
LSM5P40089 YJL047C-AYJL047C-A 135 nt3.13□□□□□ -1.91
LSM5P40089 YAL031W-AYAL031W-A 309 nt3.13□□□□□ -1.91
LSM5P40089 YKL069WYKL069W 543 nt3.13□□□□□ -1.91
LSM5P40089 DAD2YKR083C 402 nt3.13□□□□□ -1.91
LSM5P40089 YLR307C-AYLR307C-A 264 nt3.13□□□□□ -1.91
LSM5P40089 ADI1YMR009W 540 nt3.13□□□□□ -1.91
LSM5P40089 MGE1YOR232W 687 nt3.13□□□□□ -1.91
LSM5P40089 MRPL40YPL173W 894 nt3.13□□□□□ -1.91
LSM5P40089 TCP1YDR212W 1680 nt3.13□□□□□ -1.91
LSM5P40089 FLO9YAL063C 3969 nt3.13□□□□□ -1.91
LSM5P40089 CHA4YLR098C 1947 nt3.13□□□□□ -1.91
LSM5P40089 TSC11YER093C 4293 nt3.12□□□□□ -1.91
LSM5P40089 VAS1YGR094W 3315 nt3.12□□□□□ -1.91
LSM5P40089 NUR1YDL089W 1455 nt3.12□□□□□ -1.91
LSM5P40089 HLR1YDR528W 1272 nt3.12□□□□□ -1.91
LSM5P40089 YER066C-AYER066C-A 501 nt3.12□□□□□ -1.91
LSM5P40089 YFL015CYFL015C 495 nt3.12□□□□□ -1.91
LSM5P40089 IKI1YHR187W 930 nt3.12□□□□□ -1.91
LSM5P40089 SRL3YKR091W 741 nt3.12□□□□□ -1.91
LSM5P40089 VMA6YLR447C 1038 nt3.12□□□□□ -1.91
LSM5P40089 YPL142CYPL142C 318 nt3.12□□□□□ -1.91
LSM5P40089 RIM13YMR154C 2184 nt3.12□□□□□ -1.91
LSM5P40089 VHR2YER064C 1518 nt3.12□□□□□ -1.91
LSM5P40089 JJJ2YJL162C 1752 nt3.12□□□□□ -1.91
LSM5P40089 ARP5YNL059C 2268 nt3.11□□□□□ -1.91
LSM5P40089 SLU7YDR088C 1149 nt3.11□□□□□ -1.91
LSM5P40089 YDR381C-AYDR381C-A 345 nt3.11□□□□□ -1.91
LSM5P40089 ECO1YFR027W 846 nt3.11□□□□□ -1.91
LSM5P40089 YNL043CYNL043C 321 nt3.11□□□□□ -1.91
LSM5P40089 YSF3YNL138W-A 258 nt3.11□□□□□ -1.91
LSM5P40089 AVT2YEL064C 1443 nt3.1□□□□□ -1.91
LSM5P40089 FUS2YMR232W 2034 nt3.1□□□□□ -1.91
LSM5P40089 SPO14YKR031C 5052 nt3.1□□□□□ -1.91
LSM5P40089 RSM24YDR175C 960 nt3.1□□□□□ -1.91
LSM5P40089 YGL039WYGL039W 1047 nt3.1□□□□□ -1.91
LSM5P40089 CWC23YGL128C 852 nt3.1□□□□□ -1.91
LSM5P40089 YHR214C-EYHR214C-E 300 nt3.1□□□□□ -1.91
LSM5P40089 SUI2YJR007W 915 nt3.1□□□□□ -1.91
LSM5P40089 RPC25YKL144C 639 nt3.1□□□□□ -1.91
LSM5P40089 RPS21AYKR057W 264 nt3.1□□□□□ -1.91
LSM5P40089 YLR050CYLR050C 486 nt3.1□□□□□ -1.91
LSM5P40089 CDC123YLR215C 1083 nt3.1□□□□□ -1.91
LSM5P40089 YAR070CYAR070C 300 nt3.1□□□□□ -1.91
LSM5P40089 RPL20BYOR312C 519 nt3.1□□□□□ -1.91
LSM5P40089 TIM12YBR091C 330 nt3.1□□□□□ -1.91
LSM5P40089 BIT61YJL058C 1632 nt3.1□□□□□ -1.91
LSM5P40089 YNL193WYNL193W 1677 nt3.1□□□□□ -1.91
LSM5P40089 PRP22YER013W 3438 nt3.1□□□□□ -1.91
LSM5P40089 NSA1YGL111W 1392 nt3.1□□□□□ -1.91
LSM5P40089 CBP2YHL038C 1893 nt3.09□□□□□ -1.91
LSM5P40089 ARK1YNL020C 1917 nt3.09□□□□□ -1.91
LSM5P40089 SRB4YER022W 2064 nt3.09□□□□□ -1.91
LSM5P40089 BOI1YBL085W 2943 nt3.09□□□□□ -1.91
LSM5P40089 YFR054CYFR054C 579 nt3.09□□□□□ -1.91
LSM5P40089 MCR1YKL150W 909 nt3.09□□□□□ -1.91
LSM5P40089 APC9YLR102C 798 nt3.09□□□□□ -1.91
LSM5P40089 YKE2YLR200W 345 nt3.09□□□□□ -1.91
LSM5P40089 YLR257WYLR257W 966 nt3.09□□□□□ -1.91
LSM5P40089 BTS1YPL069C 1008 nt3.09□□□□□ -1.91
LSM5P40089 DSE4YNR067C 3354 nt3.09□□□□□ -1.92
LSM5P40089 VAB2YEL005C 849 nt3.08□□□□□ -1.92
LSM5P40089 CDC26YFR036W 375 nt3.08□□□□□ -1.92
LSM5P40089 MVB12YGR206W 306 nt3.08□□□□□ -1.92
LSM5P40089 YIL046W-AYIL046W-A 165 nt3.08□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms