Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.35■□□□□ 0.69
ABCD3P28288 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.35■□□□□ 0.69
ABCD3P28288 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.35■□□□□ 0.69
ABCD3P28288 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCD3P28288 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.35■□□□□ 0.69
ABCD3P28288 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ABCD3P28288 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCD3P28288 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
ABCD3P28288 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ABCD3P28288 KRT16P2-201ENST00000414673 1423 ntBASIC19.34■□□□□ 0.69
ABCD3P28288 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.34■□□□□ 0.69
ABCD3P28288 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ABCD3P28288 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
ABCD3P28288 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCD3P28288 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCD3P28288 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCD3P28288 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.34■□□□□ 0.69
ABCD3P28288 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ABCD3P28288 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ABCD3P28288 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCD3P28288 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ABCD3P28288 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.34■□□□□ 0.69
ABCD3P28288 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.34■□□□□ 0.69
ABCD3P28288 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
ABCD3P28288 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.34■□□□□ 0.69
ABCD3P28288 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ABCD3P28288 AL137784.2-201ENST00000607332 1000 ntBASIC19.34■□□□□ 0.69
ABCD3P28288 MYCNOS-205ENST00000641950 531 ntBASIC19.34■□□□□ 0.69
ABCD3P28288 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ABCD3P28288 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ABCD3P28288 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
ABCD3P28288 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.33■□□□□ 0.69
ABCD3P28288 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.33■□□□□ 0.69
ABCD3P28288 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ABCD3P28288 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ABCD3P28288 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ABCD3P28288 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ABCD3P28288 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ABCD3P28288 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ABCD3P28288 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.33■□□□□ 0.68
ABCD3P28288 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ABCD3P28288 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
ABCD3P28288 SLC7A5P1-201ENST00000568957 537 ntBASIC19.33■□□□□ 0.68
ABCD3P28288 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ABCD3P28288 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ABCD3P28288 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ABCD3P28288 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.33■□□□□ 0.68
ABCD3P28288 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ABCD3P28288 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.32■□□□□ 0.68
ABCD3P28288 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCD3P28288 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.32■□□□□ 0.68
ABCD3P28288 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCD3P28288 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.32■□□□□ 0.68
ABCD3P28288 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.32■□□□□ 0.68
ABCD3P28288 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.32■□□□□ 0.68
ABCD3P28288 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.32■□□□□ 0.68
ABCD3P28288 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.32■□□□□ 0.68
ABCD3P28288 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.32■□□□□ 0.68
ABCD3P28288 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ABCD3P28288 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCD3P28288 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCD3P28288 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCD3P28288 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCD3P28288 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.32■□□□□ 0.68
ABCD3P28288 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCD3P28288 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCD3P28288 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCD3P28288 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.31■□□□□ 0.68
ABCD3P28288 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.31■□□□□ 0.68
ABCD3P28288 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCD3P28288 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ABCD3P28288 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCD3P28288 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ABCD3P28288 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCD3P28288 AC004911.1-201ENST00000416316 871 ntBASIC19.31■□□□□ 0.68
ABCD3P28288 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCD3P28288 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.31■□□□□ 0.68
ABCD3P28288 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.31■□□□□ 0.68
ABCD3P28288 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ABCD3P28288 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.31■□□□□ 0.68
ABCD3P28288 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCD3P28288 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCD3P28288 BID-214ENST00000617586 542 ntTSL 5 BASIC19.31■□□□□ 0.68
ABCD3P28288 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ABCD3P28288 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCD3P28288 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCD3P28288 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCD3P28288 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCD3P28288 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.31■□□□□ 0.68
ABCD3P28288 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCD3P28288 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCD3P28288 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCD3P28288 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.3■□□□□ 0.68
ABCD3P28288 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ABCD3P28288 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCD3P28288 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCD3P28288 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.3■□□□□ 0.68
ABCD3P28288 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.3■□□□□ 0.68
ABCD3P28288 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ABCD3P28288 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms