Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 PTA1YAL043C 2358 nt4.62□□□□□ -1.67
MSH3P25336 GCR1YPL075W 2358 nt4.62□□□□□ -1.67
MSH3P25336 YFR010W-AYFR010W-A 189 nt4.61□□□□□ -1.67
MSH3P25336 PET54YGR222W 882 nt4.61□□□□□ -1.67
MSH3P25336 MTM1YGR257C 1101 nt4.61□□□□□ -1.67
MSH3P25336 FMP46YKR049C 402 nt4.61□□□□□ -1.67
MSH3P25336 YML108WYML108W 318 nt4.61□□□□□ -1.67
MSH3P25336 DDP1YOR163W 567 nt4.61□□□□□ -1.67
MSH3P25336 CIT1YNR001C 1440 nt4.61□□□□□ -1.67
MSH3P25336 MTR10YOR160W 2919 nt4.61□□□□□ -1.67
MSH3P25336 PHM7YOL084W 2976 nt4.6□□□□□ -1.67
MSH3P25336 GPI19YDR437W 423 nt4.6□□□□□ -1.67
MSH3P25336 YFL015CYFL015C 495 nt4.6□□□□□ -1.67
MSH3P25336 YBR051WYBR051W 351 nt4.6□□□□□ -1.67
MSH3P25336 SSL1YLR005W 1386 nt4.6□□□□□ -1.67
MSH3P25336 PRP3YDR473C 1410 nt4.6□□□□□ -1.67
MSH3P25336 YMR018WYMR018W 1545 nt4.6□□□□□ -1.67
MSH3P25336 GRS2YPR081C 1857 nt4.6□□□□□ -1.67
MSH3P25336 DPH6YLR143W 2058 nt4.6□□□□□ -1.67
MSH3P25336 PAM1YDR251W 2493 nt4.59□□□□□ -1.67
MSH3P25336 YDR320W-BYDR320W-B 138 nt4.59□□□□□ -1.67
MSH3P25336 RPL27BYDR471W 411 nt4.59□□□□□ -1.67
MSH3P25336 SPO73YER046W 432 nt4.59□□□□□ -1.67
MSH3P25336 VPS45YGL095C 1734 nt4.59□□□□□ -1.67
MSH3P25336 HIT1YJR055W 495 nt4.59□□□□□ -1.67
MSH3P25336 MNN4YKL201C 3537 nt4.59□□□□□ -1.67
MSH3P25336 FMP25YLR077W 1752 nt4.59□□□□□ -1.67
MSH3P25336 MNT4YNR059W 1743 nt4.59□□□□□ -1.67
MSH3P25336 GRE2YOL151W 1029 nt4.59□□□□□ -1.67
MSH3P25336 SFM1YOR021C 642 nt4.59□□□□□ -1.67
MSH3P25336 PHO88YBR106W 567 nt4.59□□□□□ -1.67
MSH3P25336 HAA1YPR008W 2085 nt4.58□□□□□ -1.68
MSH3P25336 NHX1YDR456W 1902 nt4.58□□□□□ -1.68
MSH3P25336 CDC50YCR094W 1176 nt4.58□□□□□ -1.68
MSH3P25336 API2YDR525W 330 nt4.58□□□□□ -1.68
MSH3P25336 BIG1YHR101C 1008 nt4.58□□□□□ -1.68
MSH3P25336 RPL14AYKL006W 417 nt4.58□□□□□ -1.68
MSH3P25336 CNB1YKL190W 528 nt4.58□□□□□ -1.68
MSH3P25336 IDP2YLR174W 1239 nt4.58□□□□□ -1.68
MSH3P25336 YNL089CYNL089C 477 nt4.58□□□□□ -1.68
MSH3P25336 RIO2YNL207W 1278 nt4.58□□□□□ -1.68
MSH3P25336 VID24YBR105C 1089 nt4.58□□□□□ -1.68
MSH3P25336 MIS1YBR084W 2928 nt4.58□□□□□ -1.68
MSH3P25336 NUP133YKR082W 3474 nt4.58□□□□□ -1.68
MSH3P25336 DAL5YJR152W 1632 nt4.57□□□□□ -1.68
MSH3P25336 YPR003CYPR003C 2265 nt4.57□□□□□ -1.68
MSH3P25336 SWC4YGR002C 1431 nt4.57□□□□□ -1.68
MSH3P25336 PSY4YBL046W 1326 nt4.57□□□□□ -1.68
MSH3P25336 snR68snR68 136 nt4.57□□□□□ -1.68
MSH3P25336 SEC53YFL045C 765 nt4.57□□□□□ -1.68
MSH3P25336 CMC2YBL059C-A 330 nt4.57□□□□□ -1.68
MSH3P25336 VAM10YOR068C 345 nt4.57□□□□□ -1.68
MSH3P25336 YOR082CYOR082C 342 nt4.57□□□□□ -1.68
MSH3P25336 YOR392WYOR392W 444 nt4.57□□□□□ -1.68
MSH3P25336 AFT2YPL202C 1251 nt4.57□□□□□ -1.68
MSH3P25336 HUL5YGL141W 2733 nt4.57□□□□□ -1.68
MSH3P25336 YBR238CYBR238C 2196 nt4.57□□□□□ -1.68
MSH3P25336 YML096WYML096W 1578 nt4.57□□□□□ -1.68
MSH3P25336 FLC1YPL221W 2382 nt4.56□□□□□ -1.68
MSH3P25336 snR59snR59 78 nt4.56□□□□□ -1.68
MSH3P25336 YDL094CYDL094C 510 nt4.56□□□□□ -1.68
MSH3P25336 YDL240C-AYDL240C-A 138 nt4.56□□□□□ -1.68
MSH3P25336 AIM7YDR063W 450 nt4.56□□□□□ -1.68
MSH3P25336 YGR017WYGR017W 894 nt4.56□□□□□ -1.68
MSH3P25336 TWF1YGR080W 999 nt4.56□□□□□ -1.68
MSH3P25336 YKL066WYKL066W 444 nt4.56□□□□□ -1.68
MSH3P25336 ARG80YMR042W 534 nt4.56□□□□□ -1.68
MSH3P25336 YAR1YPL239W 603 nt4.56□□□□□ -1.68
MSH3P25336 MBA1YBR185C 837 nt4.56□□□□□ -1.68
MSH3P25336 NDC80YIL144W 2076 nt4.55□□□□□ -1.68
MSH3P25336 CDC40YDR364C 1368 nt4.55□□□□□ -1.68
MSH3P25336 YCR045W-AYCR045W-A 351 nt4.55□□□□□ -1.68
MSH3P25336 RPS13YDR064W 456 nt4.55□□□□□ -1.68
MSH3P25336 EFB1YAL003W 621 nt4.55□□□□□ -1.68
MSH3P25336 RIM9YMR063W 720 nt4.55□□□□□ -1.68
MSH3P25336 UBP6YFR010W 1500 nt4.55□□□□□ -1.68
MSH3P25336 SSH1YBR283C 1473 nt4.55□□□□□ -1.68
MSH3P25336 TPA1YER049W 1935 nt4.54□□□□□ -1.68
MSH3P25336 SWP82YFL049W 1872 nt4.54□□□□□ -1.68
MSH3P25336 BIK1YCL029C 1323 nt4.54□□□□□ -1.68
MSH3P25336 SHE4YOR035C 2370 nt4.54□□□□□ -1.68
MSH3P25336 YDL199CYDL199C 2064 nt4.54□□□□□ -1.68
MSH3P25336 CPR5YDR304C 678 nt4.54□□□□□ -1.68
MSH3P25336 YDR340WYDR340W 303 nt4.54□□□□□ -1.68
MSH3P25336 ERV1YGR029W 570 nt4.54□□□□□ -1.68
MSH3P25336 IRC18YJL037W 675 nt4.54□□□□□ -1.68
MSH3P25336 YKL136WYKL136W 399 nt4.54□□□□□ -1.68
MSH3P25336 RNH203YLR154C 333 nt4.54□□□□□ -1.68
MSH3P25336 RPL15BYMR121C 615 nt4.54□□□□□ -1.68
MSH3P25336 RPL13BYMR142C 600 nt4.54□□□□□ -1.68
MSH3P25336 YOR331CYOR331C 558 nt4.54□□□□□ -1.68
MSH3P25336 YPR096CYPR096C 303 nt4.54□□□□□ -1.68
MSH3P25336 NCS2YNL119W 1482 nt4.54□□□□□ -1.68
MSH3P25336 KIP3YGL216W 2418 nt4.54□□□□□ -1.68
MSH3P25336 STE24YJR117W 1362 nt4.53□□□□□ -1.68
MSH3P25336 CDC55YGL190C 1581 nt4.53□□□□□ -1.68
MSH3P25336 SLK19YOR195W 2466 nt4.53□□□□□ -1.68
MSH3P25336 YDR262WYDR262W 819 nt4.53□□□□□ -1.68
MSH3P25336 YGL015CYGL015C 393 nt4.53□□□□□ -1.68
MSH3P25336 YHI9YHR029C 885 nt4.53□□□□□ -1.68
Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms