Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC25.15■■□□□ 1.62
APPP05067 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25.15■■□□□ 1.62
APPP05067 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
APPP05067 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
APPP05067 MYCNOS-205ENST00000641950 531 ntBASIC25.15■■□□□ 1.62
APPP05067 AC079834.2-201ENST00000609776 1949 ntBASIC25.15■■□□□ 1.62
APPP05067 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
APPP05067 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC25.15■■□□□ 1.62
APPP05067 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
APPP05067 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
APPP05067 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
APPP05067 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.62
APPP05067 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
APPP05067 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.62
APPP05067 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
APPP05067 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
APPP05067 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
APPP05067 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.14■■□□□ 1.62
APPP05067 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
APPP05067 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.14■■□□□ 1.62
APPP05067 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
APPP05067 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
APPP05067 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
APPP05067 AC080038.1-201ENST00000611274 1154 ntBASIC25.14■■□□□ 1.62
APPP05067 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.14■■□□□ 1.62
APPP05067 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
APPP05067 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.14■■□□□ 1.61
APPP05067 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.14■■□□□ 1.61
APPP05067 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.14■■□□□ 1.61
APPP05067 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
APPP05067 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
APPP05067 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC25.13■■□□□ 1.61
APPP05067 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
APPP05067 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
APPP05067 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
APPP05067 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
APPP05067 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
APPP05067 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
APPP05067 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
APPP05067 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC25.13■■□□□ 1.61
APPP05067 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC25.13■■□□□ 1.61
APPP05067 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
APPP05067 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
APPP05067 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
APPP05067 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
APPP05067 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
APPP05067 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
APPP05067 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
APPP05067 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
APPP05067 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.12■■□□□ 1.61
APPP05067 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.12■■□□□ 1.61
APPP05067 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
APPP05067 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.12■■□□□ 1.61
APPP05067 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC25.12■■□□□ 1.61
APPP05067 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC25.12■■□□□ 1.61
APPP05067 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC25.12■■□□□ 1.61
APPP05067 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.12■■□□□ 1.61
APPP05067 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.12■■□□□ 1.61
APPP05067 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.12■■□□□ 1.61
APPP05067 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.11■■□□□ 1.61
APPP05067 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
APPP05067 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
APPP05067 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
APPP05067 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.11■■□□□ 1.61
APPP05067 MFSD11-216ENST00000590393 1141 ntBASIC25.11■■□□□ 1.61
APPP05067 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
APPP05067 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
APPP05067 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
APPP05067 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.11■■□□□ 1.61
APPP05067 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
APPP05067 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
APPP05067 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.1■■□□□ 1.61
APPP05067 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
APPP05067 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.1■■□□□ 1.61
APPP05067 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
APPP05067 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
APPP05067 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
APPP05067 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
APPP05067 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
APPP05067 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
APPP05067 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.1■■□□□ 1.61
APPP05067 TFG-210ENST00000620299 1289 ntTSL 5 BASIC25.1■■□□□ 1.61
APPP05067 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
APPP05067 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
APPP05067 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
APPP05067 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.1■■□□□ 1.61
APPP05067 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
APPP05067 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
APPP05067 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
APPP05067 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
APPP05067 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
APPP05067 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
APPP05067 AC244015.2-201ENST00000616358 1861 ntBASIC25.09■■□□□ 1.61
APPP05067 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC25.09■■□□□ 1.61
APPP05067 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.09■■□□□ 1.61
APPP05067 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
APPP05067 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
APPP05067 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
APPP05067 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
APPP05067 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms