Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stx1aO35526 Fst-202ENSMUST00000223640 2612 ntBASIC20.68■□□□□ 0.9
Stx1aO35526 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Stx1aO35526 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stx1aO35526 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stx1aO35526 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stx1aO35526 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.68■□□□□ 0.9
Stx1aO35526 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.68■□□□□ 0.9
Stx1aO35526 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Stx1aO35526 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stx1aO35526 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Stx1aO35526 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stx1aO35526 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stx1aO35526 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stx1aO35526 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Stx1aO35526 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Stx1aO35526 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stx1aO35526 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Stx1aO35526 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.66■□□□□ 0.9
Stx1aO35526 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Stx1aO35526 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stx1aO35526 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stx1aO35526 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stx1aO35526 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Stx1aO35526 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stx1aO35526 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stx1aO35526 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
Stx1aO35526 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.66■□□□□ 0.9
Stx1aO35526 Mir7075-201ENSMUST00000184187 82 ntBASIC20.66■□□□□ 0.9
Stx1aO35526 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Stx1aO35526 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stx1aO35526 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stx1aO35526 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.66■□□□□ 0.9
Stx1aO35526 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.66■□□□□ 0.9
Stx1aO35526 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Stx1aO35526 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.66■□□□□ 0.9
Stx1aO35526 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Stx1aO35526 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Stx1aO35526 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stx1aO35526 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stx1aO35526 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stx1aO35526 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Stx1aO35526 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Stx1aO35526 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stx1aO35526 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Stx1aO35526 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.65■□□□□ 0.9
Stx1aO35526 Gm43173-201ENSMUST00000202246 593 ntBASIC20.65■□□□□ 0.9
Stx1aO35526 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.65■□□□□ 0.9
Stx1aO35526 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stx1aO35526 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stx1aO35526 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Stx1aO35526 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Stx1aO35526 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
Stx1aO35526 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Stx1aO35526 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Stx1aO35526 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Stx1aO35526 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.64■□□□□ 0.89
Stx1aO35526 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Stx1aO35526 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Stx1aO35526 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Stx1aO35526 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Stx1aO35526 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Stx1aO35526 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Stx1aO35526 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Stx1aO35526 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Stx1aO35526 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stx1aO35526 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stx1aO35526 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Stx1aO35526 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stx1aO35526 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Stx1aO35526 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.63■□□□□ 0.89
Stx1aO35526 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Stx1aO35526 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stx1aO35526 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.63■□□□□ 0.89
Stx1aO35526 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Stx1aO35526 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Stx1aO35526 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Stx1aO35526 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Stx1aO35526 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Stx1aO35526 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Stx1aO35526 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Stx1aO35526 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Stx1aO35526 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Stx1aO35526 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Stx1aO35526 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Stx1aO35526 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Stx1aO35526 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Stx1aO35526 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Stx1aO35526 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.61■□□□□ 0.89
Stx1aO35526 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stx1aO35526 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stx1aO35526 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.61■□□□□ 0.89
Stx1aO35526 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stx1aO35526 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Stx1aO35526 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Stx1aO35526 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stx1aO35526 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Stx1aO35526 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Stx1aO35526 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.61■□□□□ 0.89
Stx1aO35526 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms