Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2jO08740 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Polr2jO08740 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Polr2jO08740 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Polr2jO08740 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Polr2jO08740 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Polr2jO08740 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Polr2jO08740 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Polr2jO08740 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Polr2jO08740 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Polr2jO08740 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Polr2jO08740 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.64■□□□□ 0.42
Polr2jO08740 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Polr2jO08740 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Polr2jO08740 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Polr2jO08740 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2jO08740 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2jO08740 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Polr2jO08740 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.64■□□□□ 0.41
Polr2jO08740 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2jO08740 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2jO08740 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Polr2jO08740 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Polr2jO08740 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2jO08740 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Polr2jO08740 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Polr2jO08740 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.64■□□□□ 0.41
Polr2jO08740 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2jO08740 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2jO08740 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2jO08740 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2jO08740 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
Polr2jO08740 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.63■□□□□ 0.41
Polr2jO08740 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2jO08740 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2jO08740 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2jO08740 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2jO08740 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2jO08740 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2jO08740 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2jO08740 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2jO08740 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2jO08740 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Polr2jO08740 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2jO08740 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr2jO08740 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.62■□□□□ 0.41
Polr2jO08740 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Polr2jO08740 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr2jO08740 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr2jO08740 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Polr2jO08740 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr2jO08740 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr2jO08740 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.62■□□□□ 0.41
Polr2jO08740 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.62■□□□□ 0.41
Polr2jO08740 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Polr2jO08740 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Polr2jO08740 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Polr2jO08740 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr2jO08740 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Polr2jO08740 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Polr2jO08740 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Polr2jO08740 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Polr2jO08740 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2jO08740 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Polr2jO08740 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Polr2jO08740 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2jO08740 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2jO08740 Gm38205-201ENSMUST00000192243 258 ntBASIC17.61■□□□□ 0.41
Polr2jO08740 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2jO08740 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Polr2jO08740 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2jO08740 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2jO08740 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2jO08740 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.61■□□□□ 0.41
Polr2jO08740 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2jO08740 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.61■□□□□ 0.41
Polr2jO08740 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2jO08740 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2jO08740 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.61■□□□□ 0.41
Polr2jO08740 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr2jO08740 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.61■□□□□ 0.41
Polr2jO08740 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2jO08740 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Polr2jO08740 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2jO08740 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Polr2jO08740 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2jO08740 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2jO08740 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2jO08740 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2jO08740 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2jO08740 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2jO08740 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2jO08740 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2jO08740 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2jO08740 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Polr2jO08740 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2jO08740 Gm40848-201ENSMUST00000221998 324 ntBASIC17.6■□□□□ 0.41
Polr2jO08740 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr2jO08740 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Polr2jO08740 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms