Protein–RNA interactions for Protein: S4R1W1

Gm3839, Glyceraldehyde-3-phosphate dehydrogenase, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3839S4R1W1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Gm3839S4R1W1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm3839S4R1W1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm3839S4R1W1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Gm3839S4R1W1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm3839S4R1W1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3839S4R1W1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3839S4R1W1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3839S4R1W1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3839S4R1W1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.11■■□□□ 1.13
Gm3839S4R1W1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3839S4R1W1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Gm3839S4R1W1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Gm3839S4R1W1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm3839S4R1W1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Gm3839S4R1W1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.08■■□□□ 1.13
Gm3839S4R1W1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3839S4R1W1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3839S4R1W1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Gm3839S4R1W1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3839S4R1W1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3839S4R1W1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Gm3839S4R1W1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Gm3839S4R1W1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm3839S4R1W1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.05■■□□□ 1.12
Gm3839S4R1W1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm3839S4R1W1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.04■■□□□ 1.12
Gm3839S4R1W1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm3839S4R1W1 Gm24970-201ENSMUST00000175582 82 ntBASIC22.03■■□□□ 1.12
Gm3839S4R1W1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm3839S4R1W1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.02■■□□□ 1.12
Gm3839S4R1W1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm3839S4R1W1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Gm3839S4R1W1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm3839S4R1W1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm3839S4R1W1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Gm3839S4R1W1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm3839S4R1W1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Gm3839S4R1W1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22■■□□□ 1.11
Gm3839S4R1W1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm3839S4R1W1 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.99■■□□□ 1.11
Gm3839S4R1W1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Gm3839S4R1W1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Gm3839S4R1W1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm3839S4R1W1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm3839S4R1W1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Gm3839S4R1W1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm3839S4R1W1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Gm3839S4R1W1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.96■■□□□ 1.11
Gm3839S4R1W1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Gm3839S4R1W1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
Gm3839S4R1W1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm3839S4R1W1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm3839S4R1W1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm3839S4R1W1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm3839S4R1W1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
Gm3839S4R1W1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm3839S4R1W1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3839S4R1W1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3839S4R1W1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3839S4R1W1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3839S4R1W1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Gm3839S4R1W1 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.92■■□□□ 1.1
Gm3839S4R1W1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3839S4R1W1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Gm3839S4R1W1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Gm3839S4R1W1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.9■■□□□ 1.1
Gm3839S4R1W1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Gm3839S4R1W1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.89■■□□□ 1.1
Gm3839S4R1W1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Gm3839S4R1W1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Gm3839S4R1W1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Gm3839S4R1W1 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.88■■□□□ 1.09
Gm3839S4R1W1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm3839S4R1W1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
Gm3839S4R1W1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Gm3839S4R1W1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm3839S4R1W1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.86■■□□□ 1.09
Gm3839S4R1W1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Gm3839S4R1W1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Gm3839S4R1W1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.85■■□□□ 1.09
Gm3839S4R1W1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm3839S4R1W1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm3839S4R1W1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm3839S4R1W1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.83■■□□□ 1.09
Gm3839S4R1W1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm3839S4R1W1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Gm3839S4R1W1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Gm3839S4R1W1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Gm3839S4R1W1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.81■■□□□ 1.08
Gm3839S4R1W1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm3839S4R1W1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm3839S4R1W1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Gm3839S4R1W1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.79■■□□□ 1.08
Gm3839S4R1W1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm3839S4R1W1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Gm3839S4R1W1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.78■■□□□ 1.08
Gm3839S4R1W1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Gm3839S4R1W1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm3839S4R1W1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms