Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Atp6v1c1Q9Z1G3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.98■■□□□ 1.43
Atp6v1c1Q9Z1G3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Atp6v1c1Q9Z1G3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.95■■□□□ 1.42
Atp6v1c1Q9Z1G3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Atp6v1c1Q9Z1G3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Atp6v1c1Q9Z1G3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Atp6v1c1Q9Z1G3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Atp6v1c1Q9Z1G3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Atp6v1c1Q9Z1G3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.91■■□□□ 1.42
Atp6v1c1Q9Z1G3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Atp6v1c1Q9Z1G3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Atp6v1c1Q9Z1G3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.9■■□□□ 1.42
Atp6v1c1Q9Z1G3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.9■■□□□ 1.42
Atp6v1c1Q9Z1G3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Atp6v1c1Q9Z1G3 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.89■■□□□ 1.42
Atp6v1c1Q9Z1G3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Atp6v1c1Q9Z1G3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Atp6v1c1Q9Z1G3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Atp6v1c1Q9Z1G3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Atp6v1c1Q9Z1G3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Atp6v1c1Q9Z1G3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Atp6v1c1Q9Z1G3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Atp6v1c1Q9Z1G3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Atp6v1c1Q9Z1G3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Atp6v1c1Q9Z1G3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Atp6v1c1Q9Z1G3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Atp6v1c1Q9Z1G3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Atp6v1c1Q9Z1G3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Atp6v1c1Q9Z1G3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Atp6v1c1Q9Z1G3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Atp6v1c1Q9Z1G3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Atp6v1c1Q9Z1G3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Atp6v1c1Q9Z1G3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Atp6v1c1Q9Z1G3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Atp6v1c1Q9Z1G3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Atp6v1c1Q9Z1G3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Atp6v1c1Q9Z1G3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Atp6v1c1Q9Z1G3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Atp6v1c1Q9Z1G3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Atp6v1c1Q9Z1G3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Atp6v1c1Q9Z1G3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Atp6v1c1Q9Z1G3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Atp6v1c1Q9Z1G3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Atp6v1c1Q9Z1G3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
Atp6v1c1Q9Z1G3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Atp6v1c1Q9Z1G3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Atp6v1c1Q9Z1G3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Atp6v1c1Q9Z1G3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Atp6v1c1Q9Z1G3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Atp6v1c1Q9Z1G3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Atp6v1c1Q9Z1G3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Atp6v1c1Q9Z1G3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Atp6v1c1Q9Z1G3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.72■■□□□ 1.39
Atp6v1c1Q9Z1G3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Atp6v1c1Q9Z1G3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Atp6v1c1Q9Z1G3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Atp6v1c1Q9Z1G3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Atp6v1c1Q9Z1G3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Atp6v1c1Q9Z1G3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.66■■□□□ 1.38
Atp6v1c1Q9Z1G3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
Atp6v1c1Q9Z1G3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Atp6v1c1Q9Z1G3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Atp6v1c1Q9Z1G3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Atp6v1c1Q9Z1G3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Atp6v1c1Q9Z1G3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Atp6v1c1Q9Z1G3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Atp6v1c1Q9Z1G3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Atp6v1c1Q9Z1G3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Atp6v1c1Q9Z1G3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Atp6v1c1Q9Z1G3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Atp6v1c1Q9Z1G3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Atp6v1c1Q9Z1G3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Atp6v1c1Q9Z1G3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Atp6v1c1Q9Z1G3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Atp6v1c1Q9Z1G3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Atp6v1c1Q9Z1G3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Atp6v1c1Q9Z1G3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Atp6v1c1Q9Z1G3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Atp6v1c1Q9Z1G3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Atp6v1c1Q9Z1G3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Atp6v1c1Q9Z1G3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Atp6v1c1Q9Z1G3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Atp6v1c1Q9Z1G3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Atp6v1c1Q9Z1G3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Atp6v1c1Q9Z1G3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Atp6v1c1Q9Z1G3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Atp6v1c1Q9Z1G3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
Atp6v1c1Q9Z1G3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Atp6v1c1Q9Z1G3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Atp6v1c1Q9Z1G3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Atp6v1c1Q9Z1G3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Atp6v1c1Q9Z1G3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Atp6v1c1Q9Z1G3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Atp6v1c1Q9Z1G3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Atp6v1c1Q9Z1G3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Atp6v1c1Q9Z1G3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Atp6v1c1Q9Z1G3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Atp6v1c1Q9Z1G3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Atp6v1c1Q9Z1G3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms