Protein–RNA interactions for Protein: Q9WUT7

Ccr9, C-C chemokine receptor type 9, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9Q9WUT7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
Ccr9Q9WUT7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ccr9Q9WUT7 Amer2-203ENSMUST00000225247 2662 ntBASIC21.45■■□□□ 1.02
Ccr9Q9WUT7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccr9Q9WUT7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccr9Q9WUT7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ccr9Q9WUT7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccr9Q9WUT7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ccr9Q9WUT7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccr9Q9WUT7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccr9Q9WUT7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccr9Q9WUT7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccr9Q9WUT7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
Ccr9Q9WUT7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Ccr9Q9WUT7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ccr9Q9WUT7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccr9Q9WUT7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccr9Q9WUT7 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.37■■□□□ 1.01
Ccr9Q9WUT7 Gm16148-201ENSMUST00000119653 893 ntBASIC21.37■■□□□ 1.01
Ccr9Q9WUT7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccr9Q9WUT7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.36■■□□□ 1.01
Ccr9Q9WUT7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Ccr9Q9WUT7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.36■■□□□ 1.01
Ccr9Q9WUT7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ccr9Q9WUT7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ccr9Q9WUT7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ccr9Q9WUT7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.36■■□□□ 1.01
Ccr9Q9WUT7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccr9Q9WUT7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccr9Q9WUT7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccr9Q9WUT7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ccr9Q9WUT7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ccr9Q9WUT7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccr9Q9WUT7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccr9Q9WUT7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccr9Q9WUT7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.33■■□□□ 1
Ccr9Q9WUT7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccr9Q9WUT7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccr9Q9WUT7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ccr9Q9WUT7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.32■■□□□ 1
Ccr9Q9WUT7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ccr9Q9WUT7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccr9Q9WUT7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccr9Q9WUT7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccr9Q9WUT7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccr9Q9WUT7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccr9Q9WUT7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccr9Q9WUT7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccr9Q9WUT7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccr9Q9WUT7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccr9Q9WUT7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccr9Q9WUT7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.27■■□□□ 1
Ccr9Q9WUT7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccr9Q9WUT7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccr9Q9WUT7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ccr9Q9WUT7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ccr9Q9WUT7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccr9Q9WUT7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.24■□□□□ 0.99
Ccr9Q9WUT7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.24■□□□□ 0.99
Ccr9Q9WUT7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccr9Q9WUT7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccr9Q9WUT7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.23■□□□□ 0.99
Ccr9Q9WUT7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.23■□□□□ 0.99
Ccr9Q9WUT7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccr9Q9WUT7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccr9Q9WUT7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccr9Q9WUT7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccr9Q9WUT7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccr9Q9WUT7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ccr9Q9WUT7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccr9Q9WUT7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccr9Q9WUT7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccr9Q9WUT7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccr9Q9WUT7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccr9Q9WUT7 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccr9Q9WUT7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccr9Q9WUT7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccr9Q9WUT7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccr9Q9WUT7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccr9Q9WUT7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccr9Q9WUT7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccr9Q9WUT7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccr9Q9WUT7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccr9Q9WUT7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccr9Q9WUT7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccr9Q9WUT7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccr9Q9WUT7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccr9Q9WUT7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccr9Q9WUT7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccr9Q9WUT7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccr9Q9WUT7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccr9Q9WUT7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Ccr9Q9WUT7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccr9Q9WUT7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccr9Q9WUT7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.09■□□□□ 0.97
Ccr9Q9WUT7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccr9Q9WUT7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ccr9Q9WUT7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccr9Q9WUT7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccr9Q9WUT7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms