Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.66■■□□□ 1.06
Nubp1Q9R060 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nubp1Q9R060 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Nubp1Q9R060 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nubp1Q9R060 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.65■■□□□ 1.06
Nubp1Q9R060 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nubp1Q9R060 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nubp1Q9R060 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nubp1Q9R060 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.63■■□□□ 1.05
Nubp1Q9R060 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nubp1Q9R060 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nubp1Q9R060 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nubp1Q9R060 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nubp1Q9R060 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nubp1Q9R060 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nubp1Q9R060 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Nubp1Q9R060 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nubp1Q9R060 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Nubp1Q9R060 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.56■■□□□ 1.04
Nubp1Q9R060 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nubp1Q9R060 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Nubp1Q9R060 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nubp1Q9R060 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nubp1Q9R060 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nubp1Q9R060 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Nubp1Q9R060 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Nubp1Q9R060 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nubp1Q9R060 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nubp1Q9R060 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nubp1Q9R060 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Nubp1Q9R060 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nubp1Q9R060 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nubp1Q9R060 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Nubp1Q9R060 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Nubp1Q9R060 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nubp1Q9R060 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nubp1Q9R060 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.47■■□□□ 1.03
Nubp1Q9R060 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.47■■□□□ 1.03
Nubp1Q9R060 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Nubp1Q9R060 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.46■■□□□ 1.03
Nubp1Q9R060 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nubp1Q9R060 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nubp1Q9R060 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.45■■□□□ 1.02
Nubp1Q9R060 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nubp1Q9R060 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Nubp1Q9R060 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nubp1Q9R060 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Nubp1Q9R060 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nubp1Q9R060 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.43■■□□□ 1.02
Nubp1Q9R060 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nubp1Q9R060 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Nubp1Q9R060 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Nubp1Q9R060 Cap2-205ENSMUST00000225824 1634 ntBASIC21.42■■□□□ 1.02
Nubp1Q9R060 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nubp1Q9R060 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Nubp1Q9R060 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Nubp1Q9R060 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nubp1Q9R060 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.4■■□□□ 1.02
Nubp1Q9R060 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
Nubp1Q9R060 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Nubp1Q9R060 Gm11175-201ENSMUST00000116172 543 ntBASIC21.39■■□□□ 1.01
Nubp1Q9R060 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nubp1Q9R060 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
Nubp1Q9R060 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nubp1Q9R060 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nubp1Q9R060 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nubp1Q9R060 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Nubp1Q9R060 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Nubp1Q9R060 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nubp1Q9R060 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Nubp1Q9R060 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nubp1Q9R060 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nubp1Q9R060 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nubp1Q9R060 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
Nubp1Q9R060 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nubp1Q9R060 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nubp1Q9R060 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nubp1Q9R060 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.33■■□□□ 1.01
Nubp1Q9R060 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Nubp1Q9R060 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nubp1Q9R060 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nubp1Q9R060 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Nubp1Q9R060 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.31■■□□□ 1
Nubp1Q9R060 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nubp1Q9R060 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Nubp1Q9R060 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Nubp1Q9R060 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nubp1Q9R060 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.29■■□□□ 1
Nubp1Q9R060 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
Nubp1Q9R060 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.29■■□□□ 1
Nubp1Q9R060 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.29■■□□□ 1
Nubp1Q9R060 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Nubp1Q9R060 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nubp1Q9R060 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.28■■□□□ 1
Nubp1Q9R060 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.27■■□□□ 1
Nubp1Q9R060 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nubp1Q9R060 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nubp1Q9R060 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Nubp1Q9R060 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nubp1Q9R060 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms