Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Tdp2Q9JJX7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Tdp2Q9JJX7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Tdp2Q9JJX7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Tdp2Q9JJX7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Tdp2Q9JJX7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Tdp2Q9JJX7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Tdp2Q9JJX7 Peli2-204ENSMUST00000226513 1320 ntBASIC24.48■■□□□ 1.51
Tdp2Q9JJX7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Tdp2Q9JJX7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.47■■□□□ 1.51
Tdp2Q9JJX7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Tdp2Q9JJX7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Tdp2Q9JJX7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Tdp2Q9JJX7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Tdp2Q9JJX7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.47■■□□□ 1.51
Tdp2Q9JJX7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Tdp2Q9JJX7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Tdp2Q9JJX7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Tdp2Q9JJX7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Tdp2Q9JJX7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tdp2Q9JJX7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Tdp2Q9JJX7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Tdp2Q9JJX7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Tdp2Q9JJX7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Tdp2Q9JJX7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Tdp2Q9JJX7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.38■■□□□ 1.49
Tdp2Q9JJX7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Tdp2Q9JJX7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.37■■□□□ 1.49
Tdp2Q9JJX7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Tdp2Q9JJX7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Tdp2Q9JJX7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Tdp2Q9JJX7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Tdp2Q9JJX7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.34■■□□□ 1.49
Tdp2Q9JJX7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Tdp2Q9JJX7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Tdp2Q9JJX7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Tdp2Q9JJX7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Tdp2Q9JJX7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.33■■□□□ 1.49
Tdp2Q9JJX7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Tdp2Q9JJX7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Tdp2Q9JJX7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Tdp2Q9JJX7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.31■■□□□ 1.48
Tdp2Q9JJX7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Tdp2Q9JJX7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Tdp2Q9JJX7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Tdp2Q9JJX7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Tdp2Q9JJX7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Tdp2Q9JJX7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Tdp2Q9JJX7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Tdp2Q9JJX7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Tdp2Q9JJX7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Tdp2Q9JJX7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tdp2Q9JJX7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tdp2Q9JJX7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
Tdp2Q9JJX7 Gm16148-201ENSMUST00000119653 893 ntBASIC24.24■■□□□ 1.47
Tdp2Q9JJX7 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Tdp2Q9JJX7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Tdp2Q9JJX7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Tdp2Q9JJX7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Tdp2Q9JJX7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Tdp2Q9JJX7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Tdp2Q9JJX7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Tdp2Q9JJX7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Tdp2Q9JJX7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Tdp2Q9JJX7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tdp2Q9JJX7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Tdp2Q9JJX7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.21■■□□□ 1.47
Tdp2Q9JJX7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.21■■□□□ 1.47
Tdp2Q9JJX7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tdp2Q9JJX7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Tdp2Q9JJX7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Tdp2Q9JJX7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Tdp2Q9JJX7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Tdp2Q9JJX7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tdp2Q9JJX7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tdp2Q9JJX7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Tdp2Q9JJX7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.15■■□□□ 1.46
Tdp2Q9JJX7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Tdp2Q9JJX7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Tdp2Q9JJX7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Tdp2Q9JJX7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Tdp2Q9JJX7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Tdp2Q9JJX7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Tdp2Q9JJX7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Tdp2Q9JJX7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Tdp2Q9JJX7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Tdp2Q9JJX7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Tdp2Q9JJX7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
Tdp2Q9JJX7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Tdp2Q9JJX7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Tdp2Q9JJX7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
Tdp2Q9JJX7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Tdp2Q9JJX7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
Tdp2Q9JJX7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Tdp2Q9JJX7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Tdp2Q9JJX7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Tdp2Q9JJX7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.07■■□□□ 1.44
Tdp2Q9JJX7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.07■■□□□ 1.44
Tdp2Q9JJX7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Tdp2Q9JJX7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms