Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rbfox1Q9JJ43 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.04■□□□□ 0.96
Rbfox1Q9JJ43 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rbfox1Q9JJ43 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rbfox1Q9JJ43 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rbfox1Q9JJ43 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rbfox1Q9JJ43 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21■□□□□ 0.95
Rbfox1Q9JJ43 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rbfox1Q9JJ43 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rbfox1Q9JJ43 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rbfox1Q9JJ43 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Rbfox1Q9JJ43 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rbfox1Q9JJ43 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rbfox1Q9JJ43 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rbfox1Q9JJ43 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rbfox1Q9JJ43 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.96■□□□□ 0.95
Rbfox1Q9JJ43 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rbfox1Q9JJ43 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Rbfox1Q9JJ43 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Rbfox1Q9JJ43 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.95■□□□□ 0.94
Rbfox1Q9JJ43 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rbfox1Q9JJ43 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rbfox1Q9JJ43 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.93■□□□□ 0.94
Rbfox1Q9JJ43 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rbfox1Q9JJ43 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rbfox1Q9JJ43 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.92■□□□□ 0.94
Rbfox1Q9JJ43 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.92■□□□□ 0.94
Rbfox1Q9JJ43 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rbfox1Q9JJ43 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rbfox1Q9JJ43 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rbfox1Q9JJ43 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rbfox1Q9JJ43 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.9■□□□□ 0.94
Rbfox1Q9JJ43 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rbfox1Q9JJ43 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rbfox1Q9JJ43 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rbfox1Q9JJ43 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.89■□□□□ 0.93
Rbfox1Q9JJ43 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rbfox1Q9JJ43 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rbfox1Q9JJ43 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rbfox1Q9JJ43 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Rbfox1Q9JJ43 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rbfox1Q9JJ43 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rbfox1Q9JJ43 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rbfox1Q9JJ43 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rbfox1Q9JJ43 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rbfox1Q9JJ43 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rbfox1Q9JJ43 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rbfox1Q9JJ43 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rbfox1Q9JJ43 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rbfox1Q9JJ43 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rbfox1Q9JJ43 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rbfox1Q9JJ43 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Rbfox1Q9JJ43 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rbfox1Q9JJ43 Gm24804-201ENSMUST00000174982 85 ntBASIC20.82■□□□□ 0.92
Rbfox1Q9JJ43 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rbfox1Q9JJ43 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rbfox1Q9JJ43 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rbfox1Q9JJ43 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbfox1Q9JJ43 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rbfox1Q9JJ43 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbfox1Q9JJ43 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbfox1Q9JJ43 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rbfox1Q9JJ43 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rbfox1Q9JJ43 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbfox1Q9JJ43 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rbfox1Q9JJ43 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rbfox1Q9JJ43 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rbfox1Q9JJ43 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rbfox1Q9JJ43 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rbfox1Q9JJ43 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rbfox1Q9JJ43 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Rbfox1Q9JJ43 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Rbfox1Q9JJ43 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rbfox1Q9JJ43 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rbfox1Q9JJ43 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rbfox1Q9JJ43 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rbfox1Q9JJ43 Gm16148-201ENSMUST00000119653 893 ntBASIC20.75■□□□□ 0.91
Rbfox1Q9JJ43 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rbfox1Q9JJ43 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rbfox1Q9JJ43 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rbfox1Q9JJ43 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rbfox1Q9JJ43 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rbfox1Q9JJ43 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.73■□□□□ 0.91
Rbfox1Q9JJ43 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rbfox1Q9JJ43 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rbfox1Q9JJ43 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rbfox1Q9JJ43 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rbfox1Q9JJ43 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rbfox1Q9JJ43 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rbfox1Q9JJ43 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rbfox1Q9JJ43 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rbfox1Q9JJ43 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Rbfox1Q9JJ43 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rbfox1Q9JJ43 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rbfox1Q9JJ43 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rbfox1Q9JJ43 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rbfox1Q9JJ43 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rbfox1Q9JJ43 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rbfox1Q9JJ43 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rbfox1Q9JJ43 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms