Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rtn4rQ99PI8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rtn4rQ99PI8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Rtn4rQ99PI8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rtn4rQ99PI8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rtn4rQ99PI8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rtn4rQ99PI8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtn4rQ99PI8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.89■■□□□ 1.09
Rtn4rQ99PI8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rtn4rQ99PI8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Rtn4rQ99PI8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtn4rQ99PI8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn4rQ99PI8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn4rQ99PI8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rtn4rQ99PI8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.87■■□□□ 1.09
Rtn4rQ99PI8 Gm24970-201ENSMUST00000175582 82 ntBASIC21.86■■□□□ 1.09
Rtn4rQ99PI8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtn4rQ99PI8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rtn4rQ99PI8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
Rtn4rQ99PI8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtn4rQ99PI8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtn4rQ99PI8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.85■■□□□ 1.09
Rtn4rQ99PI8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.84■■□□□ 1.09
Rtn4rQ99PI8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Rtn4rQ99PI8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Rtn4rQ99PI8 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.82■■□□□ 1.08
Rtn4rQ99PI8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Rtn4rQ99PI8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.81■■□□□ 1.08
Rtn4rQ99PI8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Rtn4rQ99PI8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Rtn4rQ99PI8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtn4rQ99PI8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtn4rQ99PI8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtn4rQ99PI8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtn4rQ99PI8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtn4rQ99PI8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtn4rQ99PI8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rtn4rQ99PI8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Rtn4rQ99PI8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.75■■□□□ 1.07
Rtn4rQ99PI8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtn4rQ99PI8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rtn4rQ99PI8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rtn4rQ99PI8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Rtn4rQ99PI8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.74■■□□□ 1.07
Rtn4rQ99PI8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rtn4rQ99PI8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtn4rQ99PI8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn4rQ99PI8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.72■■□□□ 1.07
Rtn4rQ99PI8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn4rQ99PI8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtn4rQ99PI8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rtn4rQ99PI8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn4rQ99PI8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rtn4rQ99PI8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn4rQ99PI8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn4rQ99PI8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rtn4rQ99PI8 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.68■■□□□ 1.06
Rtn4rQ99PI8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Rtn4rQ99PI8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.67■■□□□ 1.06
Rtn4rQ99PI8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn4rQ99PI8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtn4rQ99PI8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4rQ99PI8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rtn4rQ99PI8 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.65■■□□□ 1.06
Rtn4rQ99PI8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtn4rQ99PI8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.65■■□□□ 1.06
Rtn4rQ99PI8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtn4rQ99PI8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rtn4rQ99PI8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn4rQ99PI8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn4rQ99PI8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn4rQ99PI8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
Rtn4rQ99PI8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Rtn4rQ99PI8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.61■■□□□ 1.05
Rtn4rQ99PI8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.61■■□□□ 1.05
Rtn4rQ99PI8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rtn4rQ99PI8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rtn4rQ99PI8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtn4rQ99PI8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4rQ99PI8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4rQ99PI8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4rQ99PI8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn4rQ99PI8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Rtn4rQ99PI8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn4rQ99PI8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.58■■□□□ 1.05
Rtn4rQ99PI8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.58■■□□□ 1.05
Rtn4rQ99PI8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rtn4rQ99PI8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Rtn4rQ99PI8 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.56■■□□□ 1.04
Rtn4rQ99PI8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rtn4rQ99PI8 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.55■■□□□ 1.04
Rtn4rQ99PI8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.55■■□□□ 1.04
Rtn4rQ99PI8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Rtn4rQ99PI8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rtn4rQ99PI8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rtn4rQ99PI8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.53■■□□□ 1.04
Rtn4rQ99PI8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rtn4rQ99PI8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rtn4rQ99PI8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rtn4rQ99PI8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 427.5 ms