Protein–RNA interactions for Protein: Q99LJ8

Nus1, Dehydrodolichyl diphosphate synthase complex subunit Nus1, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nus1Q99LJ8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nus1Q99LJ8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nus1Q99LJ8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nus1Q99LJ8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Nus1Q99LJ8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nus1Q99LJ8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nus1Q99LJ8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nus1Q99LJ8 Nkain2-201ENSMUST00000092602 558 ntBASIC20.72■□□□□ 0.91
Nus1Q99LJ8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nus1Q99LJ8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nus1Q99LJ8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nus1Q99LJ8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nus1Q99LJ8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nus1Q99LJ8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nus1Q99LJ8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nus1Q99LJ8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nus1Q99LJ8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Nus1Q99LJ8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nus1Q99LJ8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.67■□□□□ 0.9
Nus1Q99LJ8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.66■□□□□ 0.9
Nus1Q99LJ8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nus1Q99LJ8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nus1Q99LJ8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nus1Q99LJ8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.64■□□□□ 0.9
Nus1Q99LJ8 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.64■□□□□ 0.89
Nus1Q99LJ8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nus1Q99LJ8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nus1Q99LJ8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nus1Q99LJ8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nus1Q99LJ8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nus1Q99LJ8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nus1Q99LJ8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nus1Q99LJ8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nus1Q99LJ8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nus1Q99LJ8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nus1Q99LJ8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nus1Q99LJ8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nus1Q99LJ8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Nus1Q99LJ8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nus1Q99LJ8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nus1Q99LJ8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.56■□□□□ 0.88
Nus1Q99LJ8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nus1Q99LJ8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Nus1Q99LJ8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nus1Q99LJ8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nus1Q99LJ8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nus1Q99LJ8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Nus1Q99LJ8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nus1Q99LJ8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Nus1Q99LJ8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Nus1Q99LJ8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nus1Q99LJ8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.52■□□□□ 0.88
Nus1Q99LJ8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.52■□□□□ 0.88
Nus1Q99LJ8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nus1Q99LJ8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nus1Q99LJ8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.5■□□□□ 0.87
Nus1Q99LJ8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Nus1Q99LJ8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nus1Q99LJ8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Nus1Q99LJ8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.49■□□□□ 0.87
Nus1Q99LJ8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nus1Q99LJ8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nus1Q99LJ8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nus1Q99LJ8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nus1Q99LJ8 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.46■□□□□ 0.87
Nus1Q99LJ8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.46■□□□□ 0.87
Nus1Q99LJ8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nus1Q99LJ8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.46■□□□□ 0.87
Nus1Q99LJ8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nus1Q99LJ8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nus1Q99LJ8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.42■□□□□ 0.86
Nus1Q99LJ8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nus1Q99LJ8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nus1Q99LJ8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Nus1Q99LJ8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nus1Q99LJ8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nus1Q99LJ8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nus1Q99LJ8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nus1Q99LJ8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nus1Q99LJ8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Nus1Q99LJ8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.39■□□□□ 0.86
Nus1Q99LJ8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.39■□□□□ 0.85
Nus1Q99LJ8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Nus1Q99LJ8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nus1Q99LJ8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nus1Q99LJ8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nus1Q99LJ8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nus1Q99LJ8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nus1Q99LJ8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nus1Q99LJ8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.36■□□□□ 0.85
Nus1Q99LJ8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nus1Q99LJ8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nus1Q99LJ8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nus1Q99LJ8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nus1Q99LJ8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Nus1Q99LJ8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nus1Q99LJ8 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.33■□□□□ 0.84
Nus1Q99LJ8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.32■□□□□ 0.84
Nus1Q99LJ8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nus1Q99LJ8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms