Protein–RNA interactions for Protein: Q99J64

Rbm43, RNA-binding protein 43, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm43Q99J64 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC29,65■■■□□ 2,34
Rbm43Q99J64 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29,65■■■□□ 2,34
Rbm43Q99J64 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29,64■■■□□ 2,34
Rbm43Q99J64 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC29,64■■■□□ 2,34
Rbm43Q99J64 Gm6345-201ENSMUST00000180378 1691 ntBASIC29,64■■■□□ 2,34
Rbm43Q99J64 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29,63■■■□□ 2,33
Rbm43Q99J64 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29,63■■■□□ 2,33
Rbm43Q99J64 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC29,63■■■□□ 2,33
Rbm43Q99J64 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC29,62■■■□□ 2,33
Rbm43Q99J64 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29,62■■■□□ 2,33
Rbm43Q99J64 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29,6■■■□□ 2,33
Rbm43Q99J64 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29,6■■■□□ 2,33
Rbm43Q99J64 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29,59■■■□□ 2,33
Rbm43Q99J64 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29,58■■■□□ 2,33
Rbm43Q99J64 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29,57■■■□□ 2,32
Rbm43Q99J64 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29,57■■■□□ 2,32
Rbm43Q99J64 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29,56■■■□□ 2,32
Rbm43Q99J64 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC29,56■■■□□ 2,32
Rbm43Q99J64 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC29,56■■■□□ 2,32
Rbm43Q99J64 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29,55■■■□□ 2,32
Rbm43Q99J64 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC29,55■■■□□ 2,32
Rbm43Q99J64 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC29,55■■■□□ 2,32
Rbm43Q99J64 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29,54■■■□□ 2,32
Rbm43Q99J64 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29,54■■■□□ 2,32
Rbm43Q99J64 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29,54■■■□□ 2,32
Rbm43Q99J64 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29,53■■■□□ 2,32
Rbm43Q99J64 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC29,53■■■□□ 2,32
Rbm43Q99J64 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC29,53■■■□□ 2,32
Rbm43Q99J64 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC29,53■■■□□ 2,32
Rbm43Q99J64 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29,53■■■□□ 2,32
Rbm43Q99J64 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29,52■■■□□ 2,32
Rbm43Q99J64 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29,52■■■□□ 2,32
Rbm43Q99J64 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29,51■■■□□ 2,31
Rbm43Q99J64 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC29,49■■■□□ 2,31
Rbm43Q99J64 AC157572.2-201ENSMUST00000226970 908 ntBASIC29,49■■■□□ 2,31
Rbm43Q99J64 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29,49■■■□□ 2,31
Rbm43Q99J64 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29,49■■■□□ 2,31
Rbm43Q99J64 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29,47■■■□□ 2,31
Rbm43Q99J64 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29,46■■■□□ 2,31
Rbm43Q99J64 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29,46■■■□□ 2,31
Rbm43Q99J64 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29,46■■■□□ 2,31
Rbm43Q99J64 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC29,44■■■□□ 2,3
Rbm43Q99J64 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29,44■■■□□ 2,3
Rbm43Q99J64 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29,44■■■□□ 2,3
Rbm43Q99J64 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC29,43■■■□□ 2,3
Rbm43Q99J64 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29,43■■■□□ 2,3
Rbm43Q99J64 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29,42■■■□□ 2,3
Rbm43Q99J64 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC29,42■■■□□ 2,3
Rbm43Q99J64 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29,42■■■□□ 2,3
Rbm43Q99J64 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC29,4■■■□□ 2,3
Rbm43Q99J64 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29,38■■■□□ 2,29
Rbm43Q99J64 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC29,38■■■□□ 2,29
Rbm43Q99J64 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29,37■■■□□ 2,29
Rbm43Q99J64 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29,33■■■□□ 2,29
Rbm43Q99J64 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29,3■■■□□ 2,28
Rbm43Q99J64 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC29,29■■■□□ 2,28
Rbm43Q99J64 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29,29■■■□□ 2,28
Rbm43Q99J64 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29,29■■■□□ 2,28
Rbm43Q99J64 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29,28■■■□□ 2,28
Rbm43Q99J64 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29,27■■■□□ 2,28
Rbm43Q99J64 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29,27■■■□□ 2,28
Rbm43Q99J64 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29,27■■■□□ 2,28
Rbm43Q99J64 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29,26■■■□□ 2,28
Rbm43Q99J64 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC29,26■■■□□ 2,27
Rbm43Q99J64 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29,26■■■□□ 2,27
Rbm43Q99J64 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC29,25■■■□□ 2,27
Rbm43Q99J64 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29,24■■■□□ 2,27
Rbm43Q99J64 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC29,23■■■□□ 2,27
Rbm43Q99J64 Zxda-201ENSMUST00000117281 2621 ntBASIC29,23■■■□□ 2,27
Rbm43Q99J64 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29,22■■■□□ 2,27
Rbm43Q99J64 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29,22■■■□□ 2,27
Rbm43Q99J64 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC29,21■■■□□ 2,27
Rbm43Q99J64 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29,21■■■□□ 2,27
Rbm43Q99J64 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC29,2■■■□□ 2,26
Rbm43Q99J64 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC29,2■■■□□ 2,26
Rbm43Q99J64 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29,18■■■□□ 2,26
Rbm43Q99J64 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29,18■■■□□ 2,26
Rbm43Q99J64 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29,17■■■□□ 2,26
Rbm43Q99J64 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29,14■■■□□ 2,26
Rbm43Q99J64 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29,14■■■□□ 2,26
Rbm43Q99J64 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29,14■■■□□ 2,26
Rbm43Q99J64 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29,13■■■□□ 2,25
Rbm43Q99J64 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29,12■■■□□ 2,25
Rbm43Q99J64 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29,12■■■□□ 2,25
Rbm43Q99J64 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC29,12■■■□□ 2,25
Rbm43Q99J64 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC29,11■■■□□ 2,25
Rbm43Q99J64 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC29,11■■■□□ 2,25
Rbm43Q99J64 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29,1■■■□□ 2,25
Rbm43Q99J64 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29,1■■■□□ 2,25
Rbm43Q99J64 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29,09■■■□□ 2,25
Rbm43Q99J64 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29,09■■■□□ 2,25
Rbm43Q99J64 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29,07■■■□□ 2,24
Rbm43Q99J64 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC29,07■■■□□ 2,24
Rbm43Q99J64 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29,06■■■□□ 2,24
Rbm43Q99J64 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29,06■■■□□ 2,24
Rbm43Q99J64 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC29,05■■■□□ 2,24
Rbm43Q99J64 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29,05■■■□□ 2,24
Rbm43Q99J64 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC29,05■■■□□ 2,24
Rbm43Q99J64 Gm9939-201ENSMUST00000067161 1154 ntBASIC29,05■■■□□ 2,24
Rbm43Q99J64 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC29,04■■■□□ 2,24
Retrieved 100 of 76,532 protein–RNA pairs in 26,6 ms