Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhgc3Q91XX1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhgc3Q91XX1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhgc3Q91XX1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhgc3Q91XX1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
Pcdhgc3Q91XX1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhgc3Q91XX1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Pcdhgc3Q91XX1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhgc3Q91XX1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhgc3Q91XX1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Pcdhgc3Q91XX1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhgc3Q91XX1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhgc3Q91XX1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhgc3Q91XX1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhgc3Q91XX1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhgc3Q91XX1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhgc3Q91XX1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Pcdhgc3Q91XX1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhgc3Q91XX1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhgc3Q91XX1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhgc3Q91XX1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.2■■□□□ 1.3
Pcdhgc3Q91XX1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhgc3Q91XX1 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.18■■□□□ 1.3
Pcdhgc3Q91XX1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhgc3Q91XX1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Pcdhgc3Q91XX1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhgc3Q91XX1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.16■■□□□ 1.3
Pcdhgc3Q91XX1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Pcdhgc3Q91XX1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.16■■□□□ 1.3
Pcdhgc3Q91XX1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhgc3Q91XX1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.16■■□□□ 1.3
Pcdhgc3Q91XX1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhgc3Q91XX1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.3
Pcdhgc3Q91XX1 Gm26115-201ENSMUST00000175605 87 ntBASIC23.14■■□□□ 1.29
Pcdhgc3Q91XX1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhgc3Q91XX1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhgc3Q91XX1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.12■■□□□ 1.29
Pcdhgc3Q91XX1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhgc3Q91XX1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhgc3Q91XX1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Pcdhgc3Q91XX1 Gm27322-201ENSMUST00000184007 104 ntBASIC23.11■■□□□ 1.29
Pcdhgc3Q91XX1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhgc3Q91XX1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhgc3Q91XX1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhgc3Q91XX1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Pcdhgc3Q91XX1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhgc3Q91XX1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhgc3Q91XX1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhgc3Q91XX1 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.09■■□□□ 1.29
Pcdhgc3Q91XX1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhgc3Q91XX1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Pcdhgc3Q91XX1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.08■■□□□ 1.29
Pcdhgc3Q91XX1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhgc3Q91XX1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Pcdhgc3Q91XX1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdhgc3Q91XX1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhgc3Q91XX1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
Pcdhgc3Q91XX1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhgc3Q91XX1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhgc3Q91XX1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhgc3Q91XX1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.05■■□□□ 1.28
Pcdhgc3Q91XX1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.04■■□□□ 1.28
Pcdhgc3Q91XX1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Pcdhgc3Q91XX1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhgc3Q91XX1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhgc3Q91XX1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhgc3Q91XX1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhgc3Q91XX1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhgc3Q91XX1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcdhgc3Q91XX1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhgc3Q91XX1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.99■■□□□ 1.27
Pcdhgc3Q91XX1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Pcdhgc3Q91XX1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Pcdhgc3Q91XX1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgc3Q91XX1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgc3Q91XX1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.98■■□□□ 1.27
Pcdhgc3Q91XX1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgc3Q91XX1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgc3Q91XX1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhgc3Q91XX1 Gm8109-201ENSMUST00000194076 746 ntBASIC22.95■■□□□ 1.26
Pcdhgc3Q91XX1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhgc3Q91XX1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhgc3Q91XX1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhgc3Q91XX1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhgc3Q91XX1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhgc3Q91XX1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.91■■□□□ 1.26
Pcdhgc3Q91XX1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Pcdhgc3Q91XX1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Pcdhgc3Q91XX1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhgc3Q91XX1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.9■■□□□ 1.26
Pcdhgc3Q91XX1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhgc3Q91XX1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhgc3Q91XX1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Pcdhgc3Q91XX1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhgc3Q91XX1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhgc3Q91XX1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Pcdhgc3Q91XX1 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.86■■□□□ 1.25
Pcdhgc3Q91XX1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhgc3Q91XX1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgc3Q91XX1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms