Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
Retreg1dQ8VE91 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.36■■□□□ 1.49
Retreg1dQ8VE91 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.36■■□□□ 1.49
Retreg1dQ8VE91 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Retreg1dQ8VE91 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Retreg1dQ8VE91 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Retreg1dQ8VE91 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Retreg1dQ8VE91 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Retreg1dQ8VE91 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retreg1dQ8VE91 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.29■■□□□ 1.48
Retreg1dQ8VE91 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Retreg1dQ8VE91 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retreg1dQ8VE91 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Retreg1dQ8VE91 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retreg1dQ8VE91 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retreg1dQ8VE91 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.28■■□□□ 1.48
Retreg1dQ8VE91 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.28■■□□□ 1.48
Retreg1dQ8VE91 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retreg1dQ8VE91 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Retreg1dQ8VE91 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retreg1dQ8VE91 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Retreg1dQ8VE91 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Retreg1dQ8VE91 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Retreg1dQ8VE91 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.24■■□□□ 1.47
Retreg1dQ8VE91 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retreg1dQ8VE91 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retreg1dQ8VE91 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.23■■□□□ 1.47
Retreg1dQ8VE91 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retreg1dQ8VE91 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Retreg1dQ8VE91 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Retreg1dQ8VE91 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.21■■□□□ 1.47
Retreg1dQ8VE91 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retreg1dQ8VE91 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Retreg1dQ8VE91 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retreg1dQ8VE91 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Retreg1dQ8VE91 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.18■■□□□ 1.46
Retreg1dQ8VE91 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Retreg1dQ8VE91 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retreg1dQ8VE91 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retreg1dQ8VE91 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retreg1dQ8VE91 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retreg1dQ8VE91 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Retreg1dQ8VE91 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.16■■□□□ 1.46
Retreg1dQ8VE91 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Retreg1dQ8VE91 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retreg1dQ8VE91 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.14■■□□□ 1.45
Retreg1dQ8VE91 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Retreg1dQ8VE91 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Retreg1dQ8VE91 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Retreg1dQ8VE91 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Retreg1dQ8VE91 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retreg1dQ8VE91 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retreg1dQ8VE91 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retreg1dQ8VE91 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retreg1dQ8VE91 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retreg1dQ8VE91 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.11■■□□□ 1.45
Retreg1dQ8VE91 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Retreg1dQ8VE91 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retreg1dQ8VE91 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retreg1dQ8VE91 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Retreg1dQ8VE91 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Retreg1dQ8VE91 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.08■■□□□ 1.45
Retreg1dQ8VE91 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retreg1dQ8VE91 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Retreg1dQ8VE91 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retreg1dQ8VE91 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retreg1dQ8VE91 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.05■■□□□ 1.44
Retreg1dQ8VE91 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.05■■□□□ 1.44
Retreg1dQ8VE91 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Retreg1dQ8VE91 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Retreg1dQ8VE91 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Retreg1dQ8VE91 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.02■■□□□ 1.44
Retreg1dQ8VE91 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retreg1dQ8VE91 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retreg1dQ8VE91 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
Retreg1dQ8VE91 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retreg1dQ8VE91 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Retreg1dQ8VE91 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Retreg1dQ8VE91 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Retreg1dQ8VE91 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Retreg1dQ8VE91 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Retreg1dQ8VE91 Gm6821-201ENSMUST00000107540 542 ntBASIC24■■□□□ 1.43
Retreg1dQ8VE91 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Retreg1dQ8VE91 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Retreg1dQ8VE91 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retreg1dQ8VE91 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Retreg1dQ8VE91 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retreg1dQ8VE91 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Retreg1dQ8VE91 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Retreg1dQ8VE91 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Retreg1dQ8VE91 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retreg1dQ8VE91 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retreg1dQ8VE91 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retreg1dQ8VE91 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retreg1dQ8VE91 Gm8503-201ENSMUST00000118131 455 ntBASIC23.95■■□□□ 1.42
Retreg1dQ8VE91 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Retreg1dQ8VE91 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.93■■□□□ 1.42
Retreg1dQ8VE91 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retreg1dQ8VE91 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retreg1dQ8VE91 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.92■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms