Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Hmgcs1Q8JZK9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.62■■□□□ 1.37
Hmgcs1Q8JZK9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
Hmgcs1Q8JZK9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Hmgcs1Q8JZK9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Hmgcs1Q8JZK9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.59■■□□□ 1.37
Hmgcs1Q8JZK9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.59■■□□□ 1.37
Hmgcs1Q8JZK9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Hmgcs1Q8JZK9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Hmgcs1Q8JZK9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Hmgcs1Q8JZK9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Hmgcs1Q8JZK9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Hmgcs1Q8JZK9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.57■■□□□ 1.36
Hmgcs1Q8JZK9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Hmgcs1Q8JZK9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Hmgcs1Q8JZK9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Hmgcs1Q8JZK9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Hmgcs1Q8JZK9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Hmgcs1Q8JZK9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Hmgcs1Q8JZK9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Hmgcs1Q8JZK9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Hmgcs1Q8JZK9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Hmgcs1Q8JZK9 Gm16148-201ENSMUST00000119653 893 ntBASIC23.53■■□□□ 1.36
Hmgcs1Q8JZK9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Hmgcs1Q8JZK9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.53■■□□□ 1.36
Hmgcs1Q8JZK9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Hmgcs1Q8JZK9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.52■■□□□ 1.35
Hmgcs1Q8JZK9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Hmgcs1Q8JZK9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Hmgcs1Q8JZK9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Hmgcs1Q8JZK9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.48■■□□□ 1.35
Hmgcs1Q8JZK9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Hmgcs1Q8JZK9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
Hmgcs1Q8JZK9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Hmgcs1Q8JZK9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Hmgcs1Q8JZK9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Hmgcs1Q8JZK9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Hmgcs1Q8JZK9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Hmgcs1Q8JZK9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
Hmgcs1Q8JZK9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Hmgcs1Q8JZK9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Hmgcs1Q8JZK9 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.45■■□□□ 1.34
Hmgcs1Q8JZK9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Hmgcs1Q8JZK9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Hmgcs1Q8JZK9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.44■■□□□ 1.34
Hmgcs1Q8JZK9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Hmgcs1Q8JZK9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Hmgcs1Q8JZK9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Hmgcs1Q8JZK9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Hmgcs1Q8JZK9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.42■■□□□ 1.34
Hmgcs1Q8JZK9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Hmgcs1Q8JZK9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Hmgcs1Q8JZK9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Hmgcs1Q8JZK9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Hmgcs1Q8JZK9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Hmgcs1Q8JZK9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Hmgcs1Q8JZK9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Hmgcs1Q8JZK9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Hmgcs1Q8JZK9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hmgcs1Q8JZK9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hmgcs1Q8JZK9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hmgcs1Q8JZK9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.36■■□□□ 1.33
Hmgcs1Q8JZK9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Hmgcs1Q8JZK9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Hmgcs1Q8JZK9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Hmgcs1Q8JZK9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hmgcs1Q8JZK9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hmgcs1Q8JZK9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Hmgcs1Q8JZK9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hmgcs1Q8JZK9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Hmgcs1Q8JZK9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Hmgcs1Q8JZK9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Hmgcs1Q8JZK9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Hmgcs1Q8JZK9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Hmgcs1Q8JZK9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hmgcs1Q8JZK9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hmgcs1Q8JZK9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hmgcs1Q8JZK9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Hmgcs1Q8JZK9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hmgcs1Q8JZK9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Hmgcs1Q8JZK9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
Hmgcs1Q8JZK9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Hmgcs1Q8JZK9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Hmgcs1Q8JZK9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Hmgcs1Q8JZK9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Hmgcs1Q8JZK9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Hmgcs1Q8JZK9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.26■■□□□ 1.31
Hmgcs1Q8JZK9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Hmgcs1Q8JZK9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Hmgcs1Q8JZK9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Hmgcs1Q8JZK9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Hmgcs1Q8JZK9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hmgcs1Q8JZK9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Hmgcs1Q8JZK9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Hmgcs1Q8JZK9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Hmgcs1Q8JZK9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Hmgcs1Q8JZK9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Hmgcs1Q8JZK9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Hmgcs1Q8JZK9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Hmgcs1Q8JZK9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 216.1 ms