Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28.67■■■□□ 2.18
Depdc1aQ8CIG0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Depdc1aQ8CIG0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Depdc1aQ8CIG0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Depdc1aQ8CIG0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Depdc1aQ8CIG0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Depdc1aQ8CIG0 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.63■■■□□ 2.17
Depdc1aQ8CIG0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Depdc1aQ8CIG0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Depdc1aQ8CIG0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Depdc1aQ8CIG0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Depdc1aQ8CIG0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Depdc1aQ8CIG0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Depdc1aQ8CIG0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Depdc1aQ8CIG0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Depdc1aQ8CIG0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
Depdc1aQ8CIG0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Depdc1aQ8CIG0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Depdc1aQ8CIG0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Depdc1aQ8CIG0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Depdc1aQ8CIG0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Depdc1aQ8CIG0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.53■■■□□ 2.16
Depdc1aQ8CIG0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Depdc1aQ8CIG0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
Depdc1aQ8CIG0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.16
Depdc1aQ8CIG0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Depdc1aQ8CIG0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Depdc1aQ8CIG0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Depdc1aQ8CIG0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
Depdc1aQ8CIG0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Depdc1aQ8CIG0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Depdc1aQ8CIG0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Depdc1aQ8CIG0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Depdc1aQ8CIG0 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.48■■■□□ 2.15
Depdc1aQ8CIG0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28.46■■■□□ 2.15
Depdc1aQ8CIG0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Depdc1aQ8CIG0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Depdc1aQ8CIG0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Depdc1aQ8CIG0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
Depdc1aQ8CIG0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Depdc1aQ8CIG0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.4■■■□□ 2.14
Depdc1aQ8CIG0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Depdc1aQ8CIG0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Depdc1aQ8CIG0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Depdc1aQ8CIG0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.37■■■□□ 2.13
Depdc1aQ8CIG0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Depdc1aQ8CIG0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Depdc1aQ8CIG0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Depdc1aQ8CIG0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Depdc1aQ8CIG0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Depdc1aQ8CIG0 Gm9939-201ENSMUST00000067161 1154 ntBASIC28.33■■■□□ 2.13
Depdc1aQ8CIG0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Depdc1aQ8CIG0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.12
Depdc1aQ8CIG0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Depdc1aQ8CIG0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Depdc1aQ8CIG0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Depdc1aQ8CIG0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Depdc1aQ8CIG0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.3■■■□□ 2.12
Depdc1aQ8CIG0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Depdc1aQ8CIG0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Depdc1aQ8CIG0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Depdc1aQ8CIG0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Depdc1aQ8CIG0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28.26■■■□□ 2.11
Depdc1aQ8CIG0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Depdc1aQ8CIG0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Depdc1aQ8CIG0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
Depdc1aQ8CIG0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.22■■■□□ 2.11
Depdc1aQ8CIG0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Depdc1aQ8CIG0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
Depdc1aQ8CIG0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
Depdc1aQ8CIG0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Depdc1aQ8CIG0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Depdc1aQ8CIG0 Gm8503-201ENSMUST00000118131 455 ntBASIC28.18■■■□□ 2.1
Depdc1aQ8CIG0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
Depdc1aQ8CIG0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Depdc1aQ8CIG0 Gm6821-201ENSMUST00000107540 542 ntBASIC28.16■■■□□ 2.1
Depdc1aQ8CIG0 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.16■■■□□ 2.1
Depdc1aQ8CIG0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Depdc1aQ8CIG0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.15■■■□□ 2.1
Depdc1aQ8CIG0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Depdc1aQ8CIG0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Depdc1aQ8CIG0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.14■■■□□ 2.1
Depdc1aQ8CIG0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Depdc1aQ8CIG0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Depdc1aQ8CIG0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Depdc1aQ8CIG0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Depdc1aQ8CIG0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Depdc1aQ8CIG0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Depdc1aQ8CIG0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.1■■■□□ 2.09
Depdc1aQ8CIG0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Depdc1aQ8CIG0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Depdc1aQ8CIG0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Depdc1aQ8CIG0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.09■■■□□ 2.09
Depdc1aQ8CIG0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.09■■■□□ 2.09
Depdc1aQ8CIG0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Depdc1aQ8CIG0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Depdc1aQ8CIG0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
Depdc1aQ8CIG0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Depdc1aQ8CIG0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.06■■■□□ 2.08
Depdc1aQ8CIG0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms