Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Smc2Q8CG48 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Smc2Q8CG48 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Smc2Q8CG48 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Smc2Q8CG48 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Smc2Q8CG48 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Smc2Q8CG48 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Smc2Q8CG48 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
Smc2Q8CG48 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Smc2Q8CG48 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Smc2Q8CG48 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Smc2Q8CG48 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Smc2Q8CG48 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Smc2Q8CG48 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Smc2Q8CG48 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
Smc2Q8CG48 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Smc2Q8CG48 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Smc2Q8CG48 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Smc2Q8CG48 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.2■■■□□ 2.1
Smc2Q8CG48 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Smc2Q8CG48 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.19■■■□□ 2.1
Smc2Q8CG48 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Smc2Q8CG48 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Smc2Q8CG48 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.17■■■□□ 2.1
Smc2Q8CG48 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Smc2Q8CG48 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Smc2Q8CG48 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Smc2Q8CG48 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
Smc2Q8CG48 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Smc2Q8CG48 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Smc2Q8CG48 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Smc2Q8CG48 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Smc2Q8CG48 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC28.12■■■□□ 2.09
Smc2Q8CG48 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Smc2Q8CG48 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.11■■■□□ 2.09
Smc2Q8CG48 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Smc2Q8CG48 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Smc2Q8CG48 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Smc2Q8CG48 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Smc2Q8CG48 Amer2-203ENSMUST00000225247 2662 ntBASIC28.09■■■□□ 2.09
Smc2Q8CG48 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Smc2Q8CG48 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28.08■■■□□ 2.09
Smc2Q8CG48 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.08■■■□□ 2.09
Smc2Q8CG48 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.07■■■□□ 2.08
Smc2Q8CG48 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Smc2Q8CG48 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Smc2Q8CG48 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Smc2Q8CG48 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Smc2Q8CG48 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Smc2Q8CG48 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Smc2Q8CG48 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.04■■■□□ 2.08
Smc2Q8CG48 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Smc2Q8CG48 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Smc2Q8CG48 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Smc2Q8CG48 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
Smc2Q8CG48 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Smc2Q8CG48 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Smc2Q8CG48 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
Smc2Q8CG48 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Smc2Q8CG48 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
Smc2Q8CG48 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Smc2Q8CG48 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Smc2Q8CG48 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Smc2Q8CG48 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Smc2Q8CG48 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC27.94■■■□□ 2.06
Smc2Q8CG48 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Smc2Q8CG48 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Smc2Q8CG48 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Smc2Q8CG48 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
Smc2Q8CG48 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Smc2Q8CG48 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Smc2Q8CG48 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.91■■■□□ 2.06
Smc2Q8CG48 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Smc2Q8CG48 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Smc2Q8CG48 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
Smc2Q8CG48 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Smc2Q8CG48 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.88■■■□□ 2.05
Smc2Q8CG48 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC27.87■■■□□ 2.05
Smc2Q8CG48 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Smc2Q8CG48 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Smc2Q8CG48 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.84■■■□□ 2.05
Smc2Q8CG48 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Smc2Q8CG48 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Smc2Q8CG48 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Smc2Q8CG48 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Smc2Q8CG48 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.82■■■□□ 2.04
Smc2Q8CG48 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Smc2Q8CG48 Zfp131-205ENSMUST00000223812 663 ntBASIC27.82■■■□□ 2.04
Smc2Q8CG48 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Smc2Q8CG48 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Smc2Q8CG48 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Smc2Q8CG48 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Smc2Q8CG48 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.81■■■□□ 2.04
Smc2Q8CG48 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Smc2Q8CG48 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
Smc2Q8CG48 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Smc2Q8CG48 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC27.79■■■□□ 2.04
Smc2Q8CG48 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Smc2Q8CG48 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Smc2Q8CG48 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms