Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Smc2Q8CG48 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Smc2Q8CG48 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Smc2Q8CG48 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Smc2Q8CG48 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Smc2Q8CG48 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Smc2Q8CG48 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Smc2Q8CG48 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
Smc2Q8CG48 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Smc2Q8CG48 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Smc2Q8CG48 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Smc2Q8CG48 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Smc2Q8CG48 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Smc2Q8CG48 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Smc2Q8CG48 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
Smc2Q8CG48 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Smc2Q8CG48 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Smc2Q8CG48 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Smc2Q8CG48 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.2■■■□□ 2.1
Smc2Q8CG48 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Smc2Q8CG48 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.19■■■□□ 2.1
Smc2Q8CG48 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Smc2Q8CG48 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Smc2Q8CG48 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.17■■■□□ 2.1
Smc2Q8CG48 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Smc2Q8CG48 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Smc2Q8CG48 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Smc2Q8CG48 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
Smc2Q8CG48 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Smc2Q8CG48 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Smc2Q8CG48 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Smc2Q8CG48 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Smc2Q8CG48 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC28.12■■■□□ 2.09
Smc2Q8CG48 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Smc2Q8CG48 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.11■■■□□ 2.09
Smc2Q8CG48 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Smc2Q8CG48 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Smc2Q8CG48 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Smc2Q8CG48 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Smc2Q8CG48 Amer2-203ENSMUST00000225247 2662 ntBASIC28.09■■■□□ 2.09
Smc2Q8CG48 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Smc2Q8CG48 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28.08■■■□□ 2.09
Smc2Q8CG48 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.08■■■□□ 2.09
Smc2Q8CG48 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.07■■■□□ 2.08
Smc2Q8CG48 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Smc2Q8CG48 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Smc2Q8CG48 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Smc2Q8CG48 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Smc2Q8CG48 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Smc2Q8CG48 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Smc2Q8CG48 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.04■■■□□ 2.08
Smc2Q8CG48 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Smc2Q8CG48 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Smc2Q8CG48 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Smc2Q8CG48 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
Smc2Q8CG48 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Smc2Q8CG48 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Smc2Q8CG48 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
Smc2Q8CG48 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Smc2Q8CG48 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
Smc2Q8CG48 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Smc2Q8CG48 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Smc2Q8CG48 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Smc2Q8CG48 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Smc2Q8CG48 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC27.94■■■□□ 2.06
Smc2Q8CG48 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Smc2Q8CG48 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Smc2Q8CG48 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Smc2Q8CG48 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
Smc2Q8CG48 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Smc2Q8CG48 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Smc2Q8CG48 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.91■■■□□ 2.06
Smc2Q8CG48 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Smc2Q8CG48 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Smc2Q8CG48 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
Smc2Q8CG48 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Smc2Q8CG48 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.88■■■□□ 2.05
Smc2Q8CG48 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC27.87■■■□□ 2.05
Smc2Q8CG48 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Smc2Q8CG48 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Smc2Q8CG48 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.84■■■□□ 2.05
Smc2Q8CG48 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Smc2Q8CG48 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Smc2Q8CG48 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Smc2Q8CG48 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Smc2Q8CG48 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.82■■■□□ 2.04
Smc2Q8CG48 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Smc2Q8CG48 Zfp131-205ENSMUST00000223812 663 ntBASIC27.82■■■□□ 2.04
Smc2Q8CG48 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Smc2Q8CG48 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Smc2Q8CG48 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Smc2Q8CG48 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Smc2Q8CG48 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.81■■■□□ 2.04
Smc2Q8CG48 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Smc2Q8CG48 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
Smc2Q8CG48 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Smc2Q8CG48 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC27.79■■■□□ 2.04
Smc2Q8CG48 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Smc2Q8CG48 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Smc2Q8CG48 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms