Protein–RNA interactions for Protein: Q8C940

A730049H05Rik, RIKEN cDNA A730049H05 gene, mousemouse

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A730049H05RikQ8C940 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
A730049H05RikQ8C940 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
A730049H05RikQ8C940 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
A730049H05RikQ8C940 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
A730049H05RikQ8C940 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.42■■□□□ 1.18
A730049H05RikQ8C940 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.42■■□□□ 1.18
A730049H05RikQ8C940 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
A730049H05RikQ8C940 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
A730049H05RikQ8C940 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
A730049H05RikQ8C940 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.4■■□□□ 1.18
A730049H05RikQ8C940 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
A730049H05RikQ8C940 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.18
A730049H05RikQ8C940 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.39■■□□□ 1.18
A730049H05RikQ8C940 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
A730049H05RikQ8C940 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
A730049H05RikQ8C940 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
A730049H05RikQ8C940 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.36■■□□□ 1.17
A730049H05RikQ8C940 Gm24804-201ENSMUST00000174982 85 ntBASIC22.36■■□□□ 1.17
A730049H05RikQ8C940 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
A730049H05RikQ8C940 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
A730049H05RikQ8C940 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
A730049H05RikQ8C940 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
A730049H05RikQ8C940 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
A730049H05RikQ8C940 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
A730049H05RikQ8C940 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.3■■□□□ 1.16
A730049H05RikQ8C940 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
A730049H05RikQ8C940 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
A730049H05RikQ8C940 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
A730049H05RikQ8C940 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
A730049H05RikQ8C940 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
A730049H05RikQ8C940 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
A730049H05RikQ8C940 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
A730049H05RikQ8C940 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
A730049H05RikQ8C940 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
A730049H05RikQ8C940 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
A730049H05RikQ8C940 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
A730049H05RikQ8C940 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
A730049H05RikQ8C940 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
A730049H05RikQ8C940 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
A730049H05RikQ8C940 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
A730049H05RikQ8C940 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.25■■□□□ 1.15
A730049H05RikQ8C940 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
A730049H05RikQ8C940 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
A730049H05RikQ8C940 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
A730049H05RikQ8C940 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
A730049H05RikQ8C940 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
A730049H05RikQ8C940 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
A730049H05RikQ8C940 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
A730049H05RikQ8C940 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.21■■□□□ 1.15
A730049H05RikQ8C940 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
A730049H05RikQ8C940 Gm16148-201ENSMUST00000119653 893 ntBASIC22.21■■□□□ 1.15
A730049H05RikQ8C940 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
A730049H05RikQ8C940 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
A730049H05RikQ8C940 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
A730049H05RikQ8C940 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.2■■□□□ 1.14
A730049H05RikQ8C940 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
A730049H05RikQ8C940 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
A730049H05RikQ8C940 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
A730049H05RikQ8C940 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
A730049H05RikQ8C940 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
A730049H05RikQ8C940 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
A730049H05RikQ8C940 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
A730049H05RikQ8C940 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
A730049H05RikQ8C940 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
A730049H05RikQ8C940 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
A730049H05RikQ8C940 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
A730049H05RikQ8C940 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
A730049H05RikQ8C940 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
A730049H05RikQ8C940 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
A730049H05RikQ8C940 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
A730049H05RikQ8C940 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
A730049H05RikQ8C940 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
A730049H05RikQ8C940 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
A730049H05RikQ8C940 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
A730049H05RikQ8C940 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
A730049H05RikQ8C940 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
A730049H05RikQ8C940 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
A730049H05RikQ8C940 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
A730049H05RikQ8C940 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
A730049H05RikQ8C940 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
A730049H05RikQ8C940 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
A730049H05RikQ8C940 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
A730049H05RikQ8C940 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
A730049H05RikQ8C940 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
A730049H05RikQ8C940 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.06■■□□□ 1.12
A730049H05RikQ8C940 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
A730049H05RikQ8C940 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
A730049H05RikQ8C940 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
A730049H05RikQ8C940 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
A730049H05RikQ8C940 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
A730049H05RikQ8C940 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
A730049H05RikQ8C940 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
A730049H05RikQ8C940 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
A730049H05RikQ8C940 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
A730049H05RikQ8C940 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
A730049H05RikQ8C940 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
A730049H05RikQ8C940 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
A730049H05RikQ8C940 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
A730049H05RikQ8C940 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
A730049H05RikQ8C940 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms