Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rft1Q8C3B8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rft1Q8C3B8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rft1Q8C3B8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rft1Q8C3B8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Rft1Q8C3B8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rft1Q8C3B8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Rft1Q8C3B8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rft1Q8C3B8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Rft1Q8C3B8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.62■■□□□ 1.05
Rft1Q8C3B8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rft1Q8C3B8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rft1Q8C3B8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
Rft1Q8C3B8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rft1Q8C3B8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rft1Q8C3B8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Rft1Q8C3B8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rft1Q8C3B8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rft1Q8C3B8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rft1Q8C3B8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rft1Q8C3B8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.59■■□□□ 1.05
Rft1Q8C3B8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Rft1Q8C3B8 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.57■■□□□ 1.04
Rft1Q8C3B8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Rft1Q8C3B8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rft1Q8C3B8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rft1Q8C3B8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
Rft1Q8C3B8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rft1Q8C3B8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Rft1Q8C3B8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rft1Q8C3B8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.54■■□□□ 1.04
Rft1Q8C3B8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rft1Q8C3B8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rft1Q8C3B8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rft1Q8C3B8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rft1Q8C3B8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.53■■□□□ 1.04
Rft1Q8C3B8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rft1Q8C3B8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rft1Q8C3B8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rft1Q8C3B8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.53■■□□□ 1.04
Rft1Q8C3B8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rft1Q8C3B8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rft1Q8C3B8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rft1Q8C3B8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Rft1Q8C3B8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Rft1Q8C3B8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Rft1Q8C3B8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rft1Q8C3B8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Rft1Q8C3B8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rft1Q8C3B8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rft1Q8C3B8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.5■■□□□ 1.03
Rft1Q8C3B8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.49■■□□□ 1.03
Rft1Q8C3B8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Rft1Q8C3B8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rft1Q8C3B8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rft1Q8C3B8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rft1Q8C3B8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
Rft1Q8C3B8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rft1Q8C3B8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Rft1Q8C3B8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Rft1Q8C3B8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.46■■□□□ 1.03
Rft1Q8C3B8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rft1Q8C3B8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
Rft1Q8C3B8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.43■■□□□ 1.02
Rft1Q8C3B8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rft1Q8C3B8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rft1Q8C3B8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.43■■□□□ 1.02
Rft1Q8C3B8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rft1Q8C3B8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rft1Q8C3B8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Rft1Q8C3B8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rft1Q8C3B8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.42■■□□□ 1.02
Rft1Q8C3B8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Rft1Q8C3B8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rft1Q8C3B8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rft1Q8C3B8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rft1Q8C3B8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.4■■□□□ 1.02
Rft1Q8C3B8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rft1Q8C3B8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.4■■□□□ 1.02
Rft1Q8C3B8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rft1Q8C3B8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rft1Q8C3B8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rft1Q8C3B8 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.39■■□□□ 1.01
Rft1Q8C3B8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rft1Q8C3B8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.38■■□□□ 1.01
Rft1Q8C3B8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Rft1Q8C3B8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rft1Q8C3B8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rft1Q8C3B8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rft1Q8C3B8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rft1Q8C3B8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rft1Q8C3B8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rft1Q8C3B8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Rft1Q8C3B8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rft1Q8C3B8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rft1Q8C3B8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rft1Q8C3B8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rft1Q8C3B8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rft1Q8C3B8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.31■■□□□ 1
Rft1Q8C3B8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms