Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ppp4r4Q8C0Y0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ppp4r4Q8C0Y0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Ppp4r4Q8C0Y0 Gm9397-201ENSMUST00000200125 605 ntBASIC24.74■■□□□ 1.55
Ppp4r4Q8C0Y0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ppp4r4Q8C0Y0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ppp4r4Q8C0Y0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ppp4r4Q8C0Y0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Ppp4r4Q8C0Y0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ppp4r4Q8C0Y0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ppp4r4Q8C0Y0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ppp4r4Q8C0Y0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ppp4r4Q8C0Y0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ppp4r4Q8C0Y0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ppp4r4Q8C0Y0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Ppp4r4Q8C0Y0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ppp4r4Q8C0Y0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ppp4r4Q8C0Y0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ppp4r4Q8C0Y0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ppp4r4Q8C0Y0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ppp4r4Q8C0Y0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ppp4r4Q8C0Y0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ppp4r4Q8C0Y0 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.65■■□□□ 1.54
Ppp4r4Q8C0Y0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ppp4r4Q8C0Y0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.63■■□□□ 1.53
Ppp4r4Q8C0Y0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ppp4r4Q8C0Y0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ppp4r4Q8C0Y0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.62■■□□□ 1.53
Ppp4r4Q8C0Y0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ppp4r4Q8C0Y0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ppp4r4Q8C0Y0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ppp4r4Q8C0Y0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Ppp4r4Q8C0Y0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ppp4r4Q8C0Y0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ppp4r4Q8C0Y0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
Ppp4r4Q8C0Y0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ppp4r4Q8C0Y0 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.58■■□□□ 1.53
Ppp4r4Q8C0Y0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ppp4r4Q8C0Y0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ppp4r4Q8C0Y0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ppp4r4Q8C0Y0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Ppp4r4Q8C0Y0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
Ppp4r4Q8C0Y0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ppp4r4Q8C0Y0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.54■■□□□ 1.52
Ppp4r4Q8C0Y0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ppp4r4Q8C0Y0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ppp4r4Q8C0Y0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.54■■□□□ 1.52
Ppp4r4Q8C0Y0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.54■■□□□ 1.52
Ppp4r4Q8C0Y0 Gm24970-201ENSMUST00000175582 82 ntBASIC24.53■■□□□ 1.52
Ppp4r4Q8C0Y0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ppp4r4Q8C0Y0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ppp4r4Q8C0Y0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ppp4r4Q8C0Y0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Ppp4r4Q8C0Y0 Zxda-201ENSMUST00000117281 2621 ntBASIC24.52■■□□□ 1.52
Ppp4r4Q8C0Y0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ppp4r4Q8C0Y0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ppp4r4Q8C0Y0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ppp4r4Q8C0Y0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.49■■□□□ 1.51
Ppp4r4Q8C0Y0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ppp4r4Q8C0Y0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Ppp4r4Q8C0Y0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Ppp4r4Q8C0Y0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ppp4r4Q8C0Y0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.47■■□□□ 1.51
Ppp4r4Q8C0Y0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ppp4r4Q8C0Y0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ppp4r4Q8C0Y0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Ppp4r4Q8C0Y0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.46■■□□□ 1.51
Ppp4r4Q8C0Y0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Ppp4r4Q8C0Y0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.45■■□□□ 1.5
Ppp4r4Q8C0Y0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ppp4r4Q8C0Y0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ppp4r4Q8C0Y0 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.44■■□□□ 1.5
Ppp4r4Q8C0Y0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ppp4r4Q8C0Y0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ppp4r4Q8C0Y0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ppp4r4Q8C0Y0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.42■■□□□ 1.5
Ppp4r4Q8C0Y0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.41■■□□□ 1.5
Ppp4r4Q8C0Y0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ppp4r4Q8C0Y0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.41■■□□□ 1.5
Ppp4r4Q8C0Y0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ppp4r4Q8C0Y0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Ppp4r4Q8C0Y0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ppp4r4Q8C0Y0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ppp4r4Q8C0Y0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ppp4r4Q8C0Y0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Ppp4r4Q8C0Y0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.5
Ppp4r4Q8C0Y0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ppp4r4Q8C0Y0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ppp4r4Q8C0Y0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ppp4r4Q8C0Y0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.38■■□□□ 1.49
Ppp4r4Q8C0Y0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ppp4r4Q8C0Y0 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.37■■□□□ 1.49
Ppp4r4Q8C0Y0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ppp4r4Q8C0Y0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ppp4r4Q8C0Y0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Ppp4r4Q8C0Y0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ppp4r4Q8C0Y0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ppp4r4Q8C0Y0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ppp4r4Q8C0Y0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Ppp4r4Q8C0Y0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms