Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdkl3Q8BLF2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.15■□□□□ 0.98
Cdkl3Q8BLF2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cdkl3Q8BLF2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdkl3Q8BLF2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Cdkl3Q8BLF2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cdkl3Q8BLF2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cdkl3Q8BLF2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdkl3Q8BLF2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdkl3Q8BLF2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cdkl3Q8BLF2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.09■□□□□ 0.97
Cdkl3Q8BLF2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdkl3Q8BLF2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdkl3Q8BLF2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdkl3Q8BLF2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdkl3Q8BLF2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdkl3Q8BLF2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Cdkl3Q8BLF2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cdkl3Q8BLF2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdkl3Q8BLF2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdkl3Q8BLF2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdkl3Q8BLF2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cdkl3Q8BLF2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cdkl3Q8BLF2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
Cdkl3Q8BLF2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.05■□□□□ 0.96
Cdkl3Q8BLF2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkl3Q8BLF2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkl3Q8BLF2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkl3Q8BLF2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkl3Q8BLF2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Cdkl3Q8BLF2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdkl3Q8BLF2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdkl3Q8BLF2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.03■□□□□ 0.96
Cdkl3Q8BLF2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.02■□□□□ 0.96
Cdkl3Q8BLF2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdkl3Q8BLF2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cdkl3Q8BLF2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdkl3Q8BLF2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cdkl3Q8BLF2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cdkl3Q8BLF2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdkl3Q8BLF2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cdkl3Q8BLF2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdkl3Q8BLF2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdkl3Q8BLF2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdkl3Q8BLF2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdkl3Q8BLF2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl3Q8BLF2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cdkl3Q8BLF2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl3Q8BLF2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl3Q8BLF2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl3Q8BLF2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdkl3Q8BLF2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdkl3Q8BLF2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Cdkl3Q8BLF2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Cdkl3Q8BLF2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Cdkl3Q8BLF2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkl3Q8BLF2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkl3Q8BLF2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdkl3Q8BLF2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Cdkl3Q8BLF2 Mipep-204ENSMUST00000225043 1548 ntBASIC20.94■□□□□ 0.94
Cdkl3Q8BLF2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cdkl3Q8BLF2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Cdkl3Q8BLF2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.92■□□□□ 0.94
Cdkl3Q8BLF2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdkl3Q8BLF2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdkl3Q8BLF2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cdkl3Q8BLF2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdkl3Q8BLF2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdkl3Q8BLF2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.9■□□□□ 0.94
Cdkl3Q8BLF2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.89■□□□□ 0.94
Cdkl3Q8BLF2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cdkl3Q8BLF2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdkl3Q8BLF2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cdkl3Q8BLF2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdkl3Q8BLF2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl3Q8BLF2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl3Q8BLF2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdkl3Q8BLF2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdkl3Q8BLF2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Cdkl3Q8BLF2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdkl3Q8BLF2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cdkl3Q8BLF2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdkl3Q8BLF2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cdkl3Q8BLF2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Cdkl3Q8BLF2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cdkl3Q8BLF2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdkl3Q8BLF2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Cdkl3Q8BLF2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdkl3Q8BLF2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdkl3Q8BLF2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdkl3Q8BLF2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdkl3Q8BLF2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdkl3Q8BLF2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdkl3Q8BLF2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdkl3Q8BLF2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdkl3Q8BLF2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.79■□□□□ 0.92
Cdkl3Q8BLF2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdkl3Q8BLF2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdkl3Q8BLF2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdkl3Q8BLF2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms